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Task 3.3: Additional Applications

Task 3.3: Additional Applications . In ês C. Dutra COPPE/UFRJ 1st International EELA Conference Santiago, Chile, September 4 th , 2006. Task 3.3: Agenda. Task 3.3 Recap: people deliverables milestone Applications Status Report Conclusions Future Work Plan. Task 3.3: Recap. Recap:

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Task 3.3: Additional Applications

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  1. Task 3.3:Additional Applications Inês C. Dutra COPPE/UFRJ 1st International EELA Conference Santiago, Chile, September 4th, 2006

  2. Task 3.3: Agenda Task 3.3 Recap: people deliverables milestone Applications Status Report Conclusions Future Work Plan Santiago, Chile, September 4th, 2006

  3. Task 3.3: Recap Recap: 8 Partners/ 6 Countries (1 EU and 5 LA): CEDERJ (Brazil),  active CIEMAT (Spain),  active Citmatel (Cuba),  active SENAMHI (Peru),  active UniCan (Spain),  active UDEC (Chile),  active UFRJ (Brazil),  active UNAM (Mexico).  active Santiago, Chile, September 4th, 2006

  4. Task 3.3: contributes to Deliverables Santiago, Chile, September 4th, 2006

  5. Task 3.3: Milestone Milestone e-Education and Climate M3.2: successful use of the selected e-Education and Climate applications and tools _ M15. We have partially reached this milestone with the experiments with the climate application and one additional application. Santiago, Chile, September 4th, 2006

  6. Applications Status Report Two Application Areas: e-Education and Climate e-Education CEDERJ,  VoD CIEMAT,  VoD CUBA, CITMATEL,  CuGfL UFRJ,  Acadia, VoD, SATyrus, PILP UNAM.  LEMDist Climate SENAMHI, UniCan, UDEC. Santiago, Chile, September 4th, 2006

  7. Applications Status Report CLIMATE (SENAHMI, UNICAN, UDEC) Santiago, Chile, September 4th, 2006

  8. Application Status Report: Climate • Create a system of stationary analysis and prediction for the rain and the cycle of water (El Niño-La Niña phenomena) • Plus humidity, basins of main rivers and their tributaries, lakes, etc • Project also shared with other national and international institutions (France, UK) and projects • Lots of data concerning monthly rainings from several institutions collected and corrected with their respective errors from 1990 • From 1992, these data are daily collected (rain, temperature, wind) from 128 weather stations Santiago, Chile, September 4th, 2006

  9. Application Status Report: Climate • Krigging Bayesian methods for the different regions for the prediction of basins, caudals and lakes capacities • Dynamic prediction useful to be compared with traditional approaches • Studies will be made for different phenomena with different timescale (day to century) in order to understand them locally and their influence in the studied processes • Hope to understand slow or quick variations in the national climate (specially for high-risk situations) Santiago, Chile, September 4th, 2006

  10. 1. SENAMHI Progress Implementation of CAM over Scientific Linux Test of a short simulation to verify reasonable values according with climate patterns. Santiago, Chile, September 4th, 2006

  11. 2. SENAMHI Test on Scientific Linux Rainfall Temperature Wind Geopotential height humidity SST CAM Santiago, Chile, September 4th, 2006

  12. 2. SENAMHI Test on Scientific Linux Santiago, Chile, September 4th, 2006

  13. 3. SENAMHI Future advances Implementation of CAM on EELA GRID Prepare the input data for the real simulation. Analyze the climate simulation of CAM and compare with observed information. Santiago, Chile, September 4th, 2006

  14. Applications Status Report VoD (CEDERJ, UFRJ) Santiago, Chile, September 4th, 2006

  15. Application Status Report: VoD Santiago, Chile, September 4th, 2006

  16. Application Status Report: VoD Santiago, Chile, September 4th, 2006

  17. Application Status Report: VoD Santiago, Chile, September 4th, 2006

  18. Application Status Report: VoD Santiago, Chile, September 4th, 2006

  19. Application Status Report: VoD • Storage servers will be running on the storage elements • Multimedia server will continue to manage requests • Video streams continue to be sent to clients (UDP) • Backup of classes stored on the grid • RIO server will be a cache of classes • Integration with the remote lab Santiago, Chile, September 4th, 2006

  20. Application Status Report: VoD • How is it being ported to EELA: • Video spread across the grid machines • Current Status • Temporarily stopped because student that was working on that found a new job and left • Seeking a new student • Future work plan • Hopefully find a student to work on the porting • Diego and Edmundo agreed that the job is simple • People: • Edmundo Souza e Silva and Morganna Carmem Diniz Santiago, Chile, September 4th, 2006

  21. Applications Status Report SATyrus Santiago, Chile, September 4th, 2006

  22. Application Status Report: SATyrus SATyrus: • SATisfiability-based, neuro-symbolic architecture; • Exact formulation synthesizer. Target Problem, e.g., colouring Constraints Modeling SATyrus compiler Energy Function Optimizer, e.g., stochastic HONNs Global/Local optima Santiago, Chile, September 4th, 2006

  23. Application Status Report: SATyrus • How is it being ported to EELA multistart metaheuristics: multiple networks produced by SATyrus, each mapped to the available grid machines, each starting from a different point in the state space of solutions; • Current Status SATyrus compiler and neural network simulator producing neural networks structures and initialization data; (ready to run on the grid) • Future Work Plan Short term: have it running with multistart metaheuristics on EELA, attend the Grid School in Rio de Janeiro Long term: distributed strategy with high scale neural network spread throughout the grid and under SER synchronization • People Priscila M. V. Lima, Felipe M. G. França, Glaucia C. Pereira (going to CIEMAT), M. Mariela M. Morveli Espinoza, Ramon Diacovo, Guilherme B. M. Domingues and Inês C. Dutra. Santiago, Chile, September 4th, 2006

  24. Applications Status Report PILP (Parallel Inductive Logic Programming) Prediction of diseases Drug Discovery Social Networks Santiago, Chile, September 4th, 2006

  25. Observations Model: first order clauses Background knowledge Constraints Language bias Application Status Report: PILP • Use of Inductive Logic Programming to extract relevant knowledge from structured data active(A,B,C,D,E,F,Error) :- conf(A,B), pos_charge(A,B,C), hydrophobic(A,B,D), hdonor(A,B,E), hacc(A,B,F), dist(A,B,D,C,2.96716978243578,Error), dist(A,B,E,C,6.96028282471338,Error), dist(A,B,F,C,3.33080740962308,Error), dist(A,B,E,D,8.24269311680351,Error), dist(A,B,F,D,6.14964321711431,Error), dist(A,B,F,E,6.37276855063794,Error). Santiago, Chile, September 4th, 2006

  26. Applications Status Report: PILP The need for resources • Assume • 10-fold cross-validation • Ensembles of size 100 • 3 learning parameters • 3 splitting methods • 3 kinds of ensemble methods • 1 hour to run each experiment • Number of experiments: 27,000 • Total runtime: ~ 3 years!!!! (only for the experimentation phase) Santiago, Chile, September 4th, 2006

  27. Application Status Report: PILP • How is it being ported to EELA • Already ported, each random search is started per machine • Current Status • Prediction of Carcinogenesis in rodents almost complete • Future work plan • Full experiment, other domains • Integrate with ReGS [CCGrid 2005] and rasmol • People Inês C. Dutra, Vítor Santos Costa, Bernardo F. Costa Santiago, Chile, September 4th, 2006

  28. Applications Status Report: LEMDist NMR Food Engineering cns_solve Electrophoresis Santiago, Chile, September 4th, 2006

  29. Application Status Report: LEMDist • How is it being ported to EELA • 4 activities: • Capillarity electrophoresis: LABView for the remote access interface • NMR • Computational modelling: cns_solve • Food engineering • Current Status • implementation of the EELA testbed during the 4th tutorial in MX. 1st remote access live experiment going on • Future work plan • Short term: Testbed with NMR at the 4th tutorial in MX • Long term: LABView, food engineering and cns_solve • People • NMR and tut4: José Luis Garza Ramírez, Carlos Pineda Muñoz, Miguel Alvarez Pasaye, Moises Hernández Duarte, Jesús Cruz Guzmán • Cns_solve: Enrique Angeles Anguiano, Jesus Cruz Guzman, Rios Hulme • Repository design and user interface: Larisa Enriquez, Mario Garcia • Visualization: Carlos Pineda Muñoz , Miguel Alvarez, Moises Hernández, José Luis Garza Ramírez, Ernestina Chavez, Angel Lopez • Food engineering: Jose Luis Arjona Roman, Jaime Flores Minnuti, Laura Patricia Martínez Padilla • More info presented by WP2 Santiago, Chile, September 4th, 2006

  30. Applications Status Report: CuGfl CuGfl (Cuba, CITMATEL) Santiago, Chile, September 4th, 2006

  31. Application Status Report: CuGfl • In order to incorporate the results obtained in the areas of digital content, digital repositories and remote laboratories we mainly are interested to work on Learning Management System (LMS), digital content, multimedia repository and e-learning services in order to: • test and adapt the latest version of LMS, e-learning services, methodologies, infrastructures and multimedia repository, on grid and IPv6 environment with different access bandwidths. • Customize and optimize the LMS and e-learning service redesigning the applications and service management according to the grid and IPv6 environment. Upgrade the e-learning tools, simulators, virtual laboratories, digital repository and multimedia servers mainly based on free software. • These experiences will help to: • Provide teachers and tutors at scientific institutes and Universities with tools to access the grid in order to prepare their courses, enhancing the distributed collaborative work; • Help students to learn about grid technology by using it to solve problems and accessing remote laboratories; • Adapt content under international standards according to the distributed digital libraries and repositories; • Create courses to be given in a collaborative way. Santiago, Chile, September 4th, 2006

  32. Application Status Report: CuGfl Activities people wish to get involved: Remote laboratory · Remote laboratory customization requirement analysis · Design of the remote laboratory web interface suitable for EELA activities · Remote laboratory web interface certification · Remote laboratory use in courses and dissemination · Impact on educational processes Multimedia Interactive Course · Repository and software analysis and interactive course identification · Set up of multimedia data repository · Set up of multimedia grid virtual server · Multimedia repository and server certification · Update of multimedia interactive material Santiago, Chile, September 4th, 2006

  33. Application Status Report: CuGfl Semantic Grid · Semantic requirements capture · Customization of the Grid middleware chosen by EELA · Semantic Grid middleware certification · Customization of the semantic Grid for dissemination tools · Semantic Grid use in courses and dissemination · Impact on educational processes Collaborative Courses · Set up tutor framework · Design of collaborative courses · Pilot course deployment · Monitoring of the pilot course · Implementation in regular science courses · Impact on educational processes Santiago, Chile, September 4th, 2006

  34. Application Status Report: CuGflCuGfl(Cuba, CITMATEL) • How is it being ported to EELA • Not yet informed • Current status • CuGfL portal is live http://www.cursosenlinea.cu • http://www.redciencia.cu - April 2006 • Future Work Plan • Complete CuGfL Guidelines on Web Resources, Learning Objects and e-Learning Systems • People • Francisco Fernandez, Omar Ochoa Rodriguez, Daniel Aldama Santiago, Chile, September 4th, 2006

  35. Applications Status Report: ACADIA • Application of long-distance education • Based on a peer-to-peer technology and shared resources, called DEDALUS • ACADIA provides a learning environment for students and teachers since the building of a lesson to the delivery of works and tests. • Intended to increase the interaction between teacher and students, and among students, opening a space for discussing questions, suggestions and criticism • Intensive use of multimedia (images, videos, sounds and texts) • ACADIA in EELA intends to combine an application built for a peer-to-peer platform with a grid platform. Architecturally, ACADIA will act as a wrapper of EELA’s grid middleware. Santiago, Chile, September 4th, 2006

  36. Conclusions Great achievements since last workshop in Itacuruçá More synergy and interaction among all partners of task 3.3 People are very much involved in making the EELA infrastructure a success IMHO all of these apps may be deployed by M12 We will all work hard in the next months to achieve this challenging goal Santiago, Chile, September 4th, 2006

  37. Future Work Plan • M08 - First Deliverable D3.1.2 • Preparation of selection report – Sep 15th PO • Report is being prepared based on feedback of partners • Realistic goals – short term: • Climate • PILP • SATyrus • Long term: Acadia, LEMDist, VoD, and CuGfl • Grid School will be a must for these applications! Santiago, Chile, September 4th, 2006

  38. Future Work Plan • Still needed for some applications: • Status report • How it is being ported to EELA • Current status • Timetable • People involved (part-time? Full-time?) • Partners should bear in mind that all applications MUST be deployed by the end of the year and concentrate their efforts on it Santiago, Chile, September 4th, 2006

  39. Thanks!!! • To all groups that have been contributing to task 3.3, working hard to make EELA a success! Also to: Bernard Marechal Bernardo Costa Diego Carvalho Felipe França Jesus Casado Marcio Faerman María José Lopez Pedro Rausch Priscila Machado Rafael Mayo Raquel Muñoz Roberto Barbera Vinícius Nascimento Vítor Santos Costa Hope everyone related to task 3.3 attend the 1st Grid School in November at Rio de Janeiro!! More details on the apps presented here will be found in the final report D3.1.2 at www.eu-eela.org Santiago, Chile, September 4th, 2006

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