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National Biocomputation Center Stanford University

National Biocomputation Center Stanford University. Global Integrated Monitoring Kevin Montgomery, Ph.D. TATRC US Army Medical Research and Materiel Command. Global Integrated Monitoring. In-Situ Sensors Environmental Imagery Tracking. Remote Sensing Satellite Imagery

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National Biocomputation Center Stanford University

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  1. National Biocomputation Center Stanford University Global Integrated MonitoringKevin Montgomery, Ph.D. TATRC US Army Medical Research and Materiel Command

  2. Global Integrated Monitoring In-Situ Sensors Environmental Imagery Tracking Remote Sensing Satellite Imagery Aerial Imagery GIS Data Medical Data Public Health Medical Databases Human Info Open Source Field Reports Intelligence Analysis Integration Display Internet Laptops Desktops In-Field Mobile Devices PDAs

  3. Timeline of an event (env, bio, disaster) • Are conditions right for an event? • Environmental sensing, prediction and cueing • Event detection • Triggering, Alerts, Surveillance • Suspected agent confirmation • Clinical confirmation- in-field, hospital monitoring • Ground-truth- is it confirmed? • Field reports- worldwide network of personnel on the ground Open-source media/intelligence • Resourcing- what resources can we get to it? • Containment, management of initial response • Management- how do we deal with it? • Ongoing management

  4. Company History • Spun out of Stanford/NASA and UH EPSCoR program in early 2005 to enable worldwide integrated monitoring of the environment and its inhabitants • Collaborate/play well with others: government, academia, industry • Created a global network of wireless sensors (the InteleNet) that are integrated with many other data sources to enhance understanding of their interrelationships • Currently deployed in multiple sites in Hawaii (Lehua,Kauai, Oahu, Maui, Big Island), continental US (California, Texas, Delaware), Asia (Vietnam, Thailand), Africa (Ethiopia), and Middle East (Iraq) • Planning for future deployments in other areas of the Pacific (Palau, Palmyra, Okinawa), Africa, Asia, and other areas • Corporate office in Honolulu, Hawaii; • Research and Development offices in Silicon Valley • Field offices with collaborative partners in each deployment zone: • Hawaii (Waipa, UH), Vietnam (VAST,HSPH), Africa (Ethiopia, Senegal)

  5. Technology InteleCell / InteleNet • In-Situ Sensors • Multiparameter sensors • Remote sensor network • Local intelligence • External Data Sources Portals/InteleView • Display & Dissemination • GIS-based display over web • Custom, secure online views • Collaboration tools Intelesense Server • Server: Integration & Analysis • Integration of disparate data sources • Algorithms to analyze data • Input for future modeling and sim

  6. InteleCell™ - Wireless Sensor Device Remotely deployable, rugged smart sensors monitor many locations: • Sensors: Water, air, weather, soil, video, biosensors, PDAs • Processor: Small computer, controls devices/actuators • Wireless: Up to 14mi/20km between stations (40mi/60km dir) Sensor network can cover hundreds of miles/km • GPS-Enabled: automatic localization, sensors can be mobile • Uplink: Local Internet, Cellular, Satellite (deployable anywhere) • Network aggregates data to decrease uplink costs- particularly important for satellite • Any sensor (analog, digital, serial, …) easy to integrate • Many labs developing new sensors- we make it easy to deploy/ integrate these devices and get out of the lab and into the field • Easy to use: Sensor autodetect, Self-configuring • Secure transmission: Authentication + Encryption (256-bit AES) • Future-proof: Remotely upgradeable while deployed in the field • Frequency: Transmit on-schedule, on-event, on-demand • Advanced power management: • Self-Powered (10+ years deployment with solar recharge)

  7. Supported Sensors

  8. Sensor Stations Water sensor station Remote image sensor Remote weather station GPS-enabled manual field sampling device Remote field data collection Ridge repeater station

  9. InteleNet™ Overview • InteleCell devices form intelligent distributed mesh network • Self-configuring, self-organizing, self-repairing • Robust, reliable, no configuration necessary • Covers hundreds of miles / kilometers • Individual InteleCells acquire and transmit own data and also route data for other InteleCells • Novel Propagating Wave Algorithm autoconfigures each time • Simple, robust, extensible, redundantly indestructible

  10. InteleMote: low-cost local saturation sensing • Simple sensor types: • ID, switch, soil moisture, temp/relative humidity,… • Short-range: • Spec: 1mi/1.6km (new: 6 mi/10km, meshed, encrypted) • Tested: 2km+ (BORR), 4km+ (Garcia) • Primary power: 2+ yrs, no solar needed • Transmits at regular intervals (hourly) • Received by multiple Intelecells • Provides redundancy of reception • Low-cost: $350 • Applications: • High-density, low-cost saturation sensing • Proximity detection, security, trapping

  11. Applications: 10 Things You Can Do… Monitor rainforest, including in dark/under canopy- carbon monitoring Monitor the water quality of your stream (InteleCells with YSI sonde) Setup a flood warning system (InteleCells with stage sensors and alert trigger) Monitor the weather in your area (weather stations with InteleCells) Monitor the environment on a remote island (satellite link) Take periodic images over long periods of time of the same site (InteleCam) Setup a security system (motion-triggered camera) Track animals (collars) Monitor animal traps (Intelemote) Monitor nutrients in a stream/lake/ocean (MicroLAB)

  12. Applications: 10 More Things You Can Do… Monitor air quality in any environment, alert if hazardous to health Track cars, people Record waypoints while hiking/driving Take manual sensor readings, GPS-tagged Map RF propagation Monitor the soil moisture, humidity, and temperature in your greenhouse Monitor the weather on a vineyard and alert for various conditions Record and transmit vital signs Setup communications infrastructure in remote places Monitor temperature in your lab and get an alert on your cell phone if AC fails

  13. Implication We can reliably and securely get information from sensors and people anywhere in the world in real time with no required infrastructure Worldwide wireless distributed mesh network using Internet as backbone

  14. Integration and Analysis • Examines data across all sensors to assimilate, compare to baseline, integrate many other data sources, and generate alerts • Not going to have people watching individual screens of raw data • Right data, right time to right people in usable, actionable form • Eliminate real-world sensor variability, background noise • Integrates data from other sources automatically: • Methods: HTTP, FTP, SQL, … • Intelligent Agents fire at regular intervals- obtain info, analyze, alert • Internal XML-based parsing engines • Satellite imagery: weather, standing water (IR), vegetation, land use • Internet-accessible Data: • Public Health/Medical (syndromic surveillance data, clinical lab info, admissions, pharmaceutical sales), etc • Weather, Human intelligence, Media (Argus), Absenteeism, etc • Easy integration with existing systems and/or other systems • Modeling/Metaknowledge: hydrology models, … • Grid/cloud-based Network-centric/SOA architecture • While individual data sources are non-specific and unreliable, integration across many sources yields robust knowledge

  15. Integrated Data Sources

  16. Integrated Data Sources • Now available and fully operational • Features: • Massive amount of data available in one place: • 315,000+ layers of data now, increasing rapidly • User-data upload (KML, ESRI SHP files, imagery) • You own your data: secure to person, group, world • Ability to tap Google KML/KMZ, WMS, imagery • Directed and archival satellite imagery- anywhere on planet • Updatable, secure, high-performance Easy to add new data All the world’s data at your fingertips

  17. Implication We can integrate data from many sources, establish baselines (nominal/anomaly), generate alerts, and provide this information anywhere in the world in real-time

  18. Portals • Having all the world’s data is impressive, but only one part of the need: • Google Earth, MS Virtual Earth, NASA WW, so what? • Must provide exactly and only what people need • Must provide in a domain-specific way that addresses a need • Must enable distributed community of interest to collaborate • Therefore, we created domain-specific, community-of-interest portals: • Enables groups of similar interests to come together in virtual location • Provides advanced features: web-browser-based visualization, user data upload/download (GIS data, imagery, etc), user forums/blogs, even videoconferencing/VOIP, Web form-based data input, Excel/CSV/GPX upload • Allows customization and administration by the groups- which layers, functionality, features, content, users, etc • Empowers groups to collaborate

  19. Portals: examples

  20. InteleView™ – 3D Worldwide Visualizer • Fast, interactive 3D visualizer- Allows user to "zoom in" to anywhere on the planet and pull down many different types of high-resolution satellite imagery from servers located over the Internet, and "fly around" the terrain • Features: • 3D satellite maps: Landsat, Urban Ortho, anything- available automatically • ArcGIS data: Shape-files fully supported- users can upload to server • Real-time display of sensor data, annotations and interactive layer gen • Integrative: Data from thousands of sources, all Google data supported • Icon-based display of sensor sites, icons link to more detailed information • Dynamic Icons(real-time location tracking of people/equipment, status) • Advanced visualization features utilizing the 3D view of sensor locations • Collaborative: Real-time collaboration built in: videoconf, annotation • Location-based search • Open Source - Built on NASA WorldWind platform, active contributor • Cross Platform: PC, Mac, Linux

  21. Server Facility • Currently online and fully operational • Capabilities: • Network: • Up to 10 Gbps peak bandwidth • Worldwide dedicated network • Top 10 Internet systems in world • Facility: • Full battery backup with dedicated generator, 72+ hr offgrid capacity • Secure facility, staffed 24x7, video surveillance, card keyed • Servers: • Multiple, redundant, load-balanced cluster of servers • Dedicated data/imaging servers (16TB user data and imagery, +48TB soon) • High performance, scalable architecture- 1M users via Cloud Computing

  22. Implication We can view, interact, and explore data from anywhere in the world and collaborate with others to develop understanding and manage an event

  23. Example Deployments Hawaii Ecological Monitoring Project: • Ken Kaneshiro/Mike Kido (CCRT) • Kauai (Limahuli, Waipa, Lawai), Oahu (Manoa), Maui (ML&P) Northern California Deployments: • Blue Oak Ranch Reserve (BORR) • Garcia Forest Reserve Vietnam Waterborne Illness Project: • Hanoi (TienHai, Westlake) • Environmental sensors integrated with public health data • Study water-borne illness, track H5N1, dengue, HIV cases • Partners: • VAST, HSPH, US DHHS, State Dept Health Attaché • University of Hawaii: Drs Burgess, Wilcox, Gubler • US Embassy: Office of the Ambassador Ethiopia Clinical Monitoring Project: • PEPFAR/USAID/CDC/TATRC project Others: DOD, DTRA project work

  24. Hawaii Environmental Monitoring • Lehua: islet off coast • Kauai: Limahuli/Waipa, Lawai, Makauahi • Maui: Maui Land and Pineapple • Oahu: Manoa, Makaha, Mt Kaala • Hawaii: Hilo over Saddle Rd

  25. Kauai Deployment Integrated water, weather, other sensors with GPS localization over custom wireless voice/data network with secure uplink to Internet-based GIS website Also supports vector tracking, manual sampling & collection, remote worker tracking Integrates human knowledge as well: land use patterns, vegetation, manual sampling/surveys, elder/social info

  26. Other UH Affiliated Projects • CIMES –Center for Island, Maritime, and Extreme Env Security • DHS-funded Center for maritime situational awareness • Integrate sensor and systems data, analyze, visualize • Army – Mt Kaala • Real-time monitoring of invasive animal traps, security video • DOFAW – Makiki Valley • Water quality and stream flow monitoring stations • GIS data hosting, integration, visualization • IGERT Infectious Disease Project- Thailand • JABSOM (Bruce Wilcox, Durrell Kapan, Ron Paik) project for tracking infectious disease vectors, linked with env data

  27. CIMES

  28. Vietnam Deployment Hanoi area: • TienHai: (Thai Binh Province- H5N1 affected area) • Environmental sensors (water quality, weather) • Integration with health data supplied by HSPH • Easy web-based syndromic surveillance data input • Designed for daily use to replace current reporting system • Usable for entire country if needed • Generalized syndromic surveillance system: • General symptoms, cryptosporidium, leptosporosis, H5N1, dengue, HIV • Easily expandable to other countries/regions • Westlake: • Testbed deployment during development

  29. Tien Hai Deployment Transmit wirelessly to district health office where uplinked via Internet and clinical data are entered Sensors deployed in drinking water supply To servers located at HSPH office in Hanoi for web-based access

  30. Thailand Deployment IGERT Infectious Disease Project- Thailand • JABSOM (Bruce Wilcox, Durrell Kapan, Ron Paik) project for tracking infectious disease vectors, linked with env data

  31. Ethiopia Project Collaborative Partners: TATRC, PEPFAR program (CDC, USAID, US Embassy), Defense National University, Jimma University, Govt of Ethiopia Relevant Technologies: • Information access: (patient info, inventory) • BMIS-T: Patient records, blood info • Intelesense: Rugged, self-powered wireless networking • TATRC-wide: Easy to use, field-deployable clinical devices

  32. Mexico Portal

  33. Shoreland Haiti Portal

  34. The Future- where we’re headed We have an amazing tool- let’s use it! • Environmental: - preserve environment and culture • Expand scope: NEON et al, international (PS, CCF) • Marine: NOAA, IOOS, PACMAN • Social information: OHA • Biodefense: - prevent disease and save lives • Expanding biosurveillance and travel med • Homeland Security: UH CIMES, DTRA • Medical Situational Awareness & Logistics • Civil Defense and disaster management • Remote medical care, awareness, and management • Social: - help people become more • Workforce development and social improvement

  35. Summary • Technology: • Easy to get data from anywhere in the world • Powerful data integration and visualization • Stable, reliable platform and service • Company: • Hawaii-based company with worldwide impact on environment, defense, and other areas www.intelesense.net Explore your world

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