Homochirality models and results
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Homochirality: models and results. Axel Brandenburg, Anja Andersen, Susanne H öfner , Martin Nilsson. To appear in Orig. Life Evol. Biosph., q-bio.BM/0401036. Photosynthesis. Requires chlorophyll as catalyst What about chiralitry?.

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Homochirality: models and results

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Homochirality models and results

Homochirality:models and results

Axel Brandenburg, Anja Andersen, Susanne Höfner, Martin Nilsson

To appear in Orig. Life Evol. Biosph., q-bio.BM/0401036



Requires chlorophyll

as catalyst

What about chiralitry?

Aminoacids in protein left handed sugars in dna and rna right handed

Aminoacids in protein: left-handedSugars in DNA and RNA: right-handed





Louis Pasteur


Racemic mixture

(from lecture of

Antoine Weiss)

Racemic mixture


dating method

Miller urey experiment

Miller/Urey experiment

Wait 1 week

15 organic compounds

2% amino acids (11 different ones)

racemic mixture

Chirality and origin of life

Chirality and origin of life

  • Dead stuff not chiral, so is chirality

    • with racemic mixture: structure fragile

  • Importance:

    • Prerequisite of life (provides curvature and twist)

    • Consequence of life (enzymatic reactions)

  • Miller-Urey amino acids: both chiralities

    • in Murchison meteorite: mostly left-handed!

    • but contamination is debated…

  • Reasons discussed: circularly polarized light, beta-decay (weak force), homochiral template

Relevant experiments nucleotides

Relevant experiments: nucleotides

 Mononucleotides with wrong

Chirality terminate chain growth



template-directed oligomerization

poly (CD)  oligo (GD)

(using HPLC)



Joyce, et al. (incl. Orgel) (1984)

Contergan was sold as racemic mixture

Contergan: was sold as racemic mixture

Cures morning sickness

during pregnancy

causes misformations

(abundaned in December 1961)

Relevant experiments crystals

Relevant experiments: crystals

Crystal growth, many different

nucleation sites: racemic mixture

Crystal growth with stirring:

primary nucleation suppressed

Autocatalytic self-amplification?

Frank (1953), Goldanskii & Kuzmin (1989), …

Auto catalytic effect in dead matter

Auto-catalytic effect in dead matter

Alkanol with 2% e.e.

Treated with


Model by saito hyuga jan 2004

Model by Saito & Hyuga (Jan 2004)

Bimodal behavior

Model by sandars dec 2003 oleb

Model by Sandars (Dec 2003, OLEB)

Reaction for left-handed monomers

Loss term for each constituent

Combined equations

Combined equations

Loss term for each constituent

Including enantiomeric cross inhibition

Including enantiomeric cross-inhibition

Loss term for each constituent

Racemic solution ~21-n

Coupling to substrate s

Coupling to substrate S

Source of L1 monomers QL

QL comes from substrate

acts as a sink of S

S sustained by source Q

Catalytic properties of substrate

(depending on how much L and R one has)

 QL = QR(Ln,Rn)

Self catalytic effect

Self-catalytic effect

Form of QL = QR(Ln,Rn)

Possible proposals for CL(similarly for CR)

Birfurcation properties

Birfurcation properties

 Mononucleotides with wrong

Chirality terminate chain growth



Relative perturbation of

racemic solution, 10-4

Conservation law

Dependence on fidelity

Conservation law


Differences to sandars

Differences to Sandars

  • Coupling to substrate: here proportional to EL

    • in Sandars: [LN]

  • Outer boundary condition: here open

    • in Sandars: prescribed damping term

  • Future extensions:

    • Chain braking

    • add spatial 3D dynamics

Reduced equations

Reduced equations

Quantitatively close to full model

Initial bias

Initial bias

Effect in reality very weak

Spatially extended model

Spatially extended model

with Tuomas Multamäki

Reaction-diffusion equation

Proto type: Fisher’s equation

Propagating front solutions

wave speed

1d model reaction diffusion equation

1D model (reaction-diffusion equation)

Propagation into racemic environment

2d model reaction diffusion equation

2D model (reaction-diffusion equation)

Short run

2d model reaction diffusion equation1

2D model (reaction-diffusion equation)

Time scale longer than for simple fronts

P polymerization olymerization in 1d

P polymerization olymerization in 1D

chain growth, Rn and Ln in different places

The rna world

Walter Gilbert


The RNA world

  • Central dogma of chemistry of life

    • DNA  RNA  protein


  • all enzymes are themselves proteins?

Rna itself as enzyme

RNA itself as enzyme

Pre rna worlds

pre-RNA worlds

Many problems: stability of sugars

2-amino ethyl glycin


Pre rna worlds1

pre-RNA worlds

better alternative: Nelson, Levi, Miller (2000)

PE Nielsen (1993)

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