'Distance matrix' presentation slideshows

Sequence Diversity in Evolution and Crop Improvement

Sequence Diversity in Evolution and Crop Improvement. Teosinte. Maize Landraces. Inbreds/Hybrids. Sherry Flint-Garcia Research Geneticist USDA-ARS MU Division of Plant Sciences. Photos courtesy J. Doebley. Sequence Diversity. Evolution: What are the forces that cause evolution?

1.29k views • 69 slides

ICS 278: Data Mining Lectures 12,13: Clustering Algorithms

1.04k views • 66 slides

Molecular Evolution

817 views • 56 slides

MCB 5472

MCB 5472. Phylogenetic reconstruction PHYLIP. Peter Gogarten Office: BSP 404 phone: 860 486-4061, Email: gogarten@uconn.edu. Terminology - reminder.

1.6k views • 49 slides

Phylogenetics 3 Assessing confidence in phylogenies Distance methods Models of molecular evolution

Phylogenetics 3 Assessing confidence in phylogenies Distance methods Models of molecular evolution . Estimating confidence in tree topologies Congruence Consensus trees The bootstrap applied to phylogenetics Bremer support (the Decay Index)

801 views • 47 slides

Bioinformatics

Lecture 9 Phylogenetic Prediction. Bioinformatics. Dr. Aladdin Hamwieh Khalid Al- shamaa Abdulqader Jighly. Aleppo University Faculty of technical engineering Department of Biotechnology. 2010-2011. Phylogenetic Trees and Dissimilarity estimation. Historical Note.

934 views • 43 slides

Undergraduate Research

508 views • 40 slides

Phylogenetic trees

Phylogenetic trees. Phylogeny is the inference of evolutionary relationships. Traditionally, phylogeny relied on the comparison of morphological features between organisms. Today, molecular sequence data are mainly used for phylogenetic analyses. One tree of life A sketch Darwin made

1.41k views • 39 slides

Evolution in dogs

Evolution in dogs. CS-374 Abhinay Nagpal abhinay@stanford.edu. Papers that are discussed. Evolution in dogs: A single IGF1 allele is a major determinant of small size in dogs Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication.

1.06k views • 38 slides

Phylogenetic Methods

Phylogenetic Methods. Understanding Trees Alignments Distances Clustering Methods Bootstrapping Likelihood Methods Parsimony. Phylogeny of Mammals a good example where molecular sequences have led to a big improvement of our understanding of evolution. Cao et al. (2000) Gene.

511 views • 35 slides

Create Photo-Realistic Talking Face

Create Photo-Realistic Talking Face. Changbo Hu 2001.11.26 * This work was done during visiting Microsoft Research China with Baining Guo and Bo Zhang. Outline. Introduction of talking face Motivations System overview Techniques Conclusions. Introduction. What is a talking face

552 views • 35 slides

Multi-Vehicle Exploration and Routing in Adversarial Environments

Multi-Vehicle Exploration and Routing in Adversarial Environments. Eric Feron Farmey Joseph Jerome le Ny Program Review Meeting The Stata Center at MIT June 22, 2005. Exploration for UAVs. Ambush-aware Routing. Exploration with stochastic agents.

493 views • 34 slides

On Updating Torsion Angles of Molecular Conformations

On Updating Torsion Angles of Molecular Conformations. Vicky Choi Department of Computer Science Virginia Tech (with Xiaoyan Yu, Wenjie Zheng). Molecular Conformation. Conformation : the relative positions of atoms in the 3D structure of a molecule.

736 views • 29 slides

Clustering in Microarray Data-mining and Challenges Beyond

CS491jh presentation March 7, 2002. Clustering in Microarray Data-mining and Challenges Beyond. Qing-jun Wang Center for Biophysics & Computational Biology University of Illinois at Urbana-Champaign. Clustering. What?. Where?. How?. Challenges beyond clustering. Data Acquisition.

431 views • 28 slides

Two Dimensional Arrays

Two Dimensional Arrays. Two-dimensional Arrays. A two-dimensional array consists of both rows and columns of elements. It is essentially a matrix. To declare a two-dimensional array, we merely use two sets of square brackets. The first contains the number of rows

473 views • 28 slides

The Evolutionary Basis of Bioinformatics: An Introduction to Phylogenetics

629 views • 27 slides

Nonlinear Dimensionality Reduction Frameworks

Nonlinear Dimensionality Reduction Frameworks. Rong Xu Chan su Lee. Outline. Intuition of Nonlinear Dimensionality Reduction(NLDR) ISOMAP LLE NLDR in Gait Analysis. Intuition: how does your brain store these pictures?. Brain Representation. Brain Representation. Every pixel?

529 views • 22 slides

The Structure of Urban Residential Housing Sub-markets of Hong Kong

The Structure of Urban Residential Housing Sub-markets of Hong Kong. Presented by Daniel LO, PhD The University of Hong Kong Email: daniello@hku.hk. Introduction. Widely acknowledged that housing submarkets should be adopted as a working hypothesis. Objective:

368 views • 20 slides

Tree Reconstruction

236 views • 13 slides

Chapter 14: Multidimensional Scaling: British Water Voles and Voting in US Congress

Chapter 14: Multidimensional Scaling: British Water Voles and Voting in US Congress. By: Laila, Rozie, Vimal . Introduction. The aim of the study was to compare British populations of water voles with those in Europe. To investigate whether more than one species might be present in Britain. .

277 views • 9 slides