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Here today representing PHENIX Irina Sourikova

Collaboration at RHIC 550 Collaborators from 75 institutions in 15 countries. Co-Spokespersons Dave Morrison. Here today representing PHENIX Irina Sourikova. PHENIX Computing Professional and database maven. and Jamie Nagle. and Brant Johnson. PHENIX

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Here today representing PHENIX Irina Sourikova

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  1. Collaboration at RHIC550 Collaborators from 75 institutions in 15 countries Co-Spokespersons Dave Morrison Here today representing PHENIX Irina Sourikova PHENIX Computing Professional and database maven and Jamie Nagle and Brant Johnson PHENIX Publications Coordinator and APS Associate Editor

  2. … INSPIRE: f cn PHENIX (found 840 records)

  3. INSPIRE + BibTeX + DOI + hyperref + pdflatex use of INSPIRE-generated BibTeX keys aids multiple authors working on the same document (btw, are these keys permanent?) “sPHENIX” upgrade proposal to DOE our internal documents become jumping-off points to the relevant literature our submissions to the arXiv and journals us the same BibTeX from INSPIRE

  4. Need interoperability among INSPIRE, BibTeX, and RevTeX Examples: INSPIRE BibTeX/RevTeX (APS) @misc{Lim:2014fga, author = "Lim, Sanghoon", collaboration = "PHENIX collaboration", note = “arXiv:1402.7147”, } %title = "{PHENIX recent heavy flavor results}", %year = "2014", %eprint = "1402.7147", %archivePrefix = "arXiv", %primaryClass = "nucl-ex", @article{Adler:2006wg, author = "Adler, S. S. and others", title = "{Centrality dependence of charged hadron production in deuteron + gold and nucleon + gold collisions at s(NN)**(1/2) = 200-GeV}", collaboration = "PHENIX Collaboration", journal = "Phys. Rev. C", volume = “77", pages = "024912", doi = "10.1103/PhysRevC.77.024912", year = "2008", } %eprint = "0711.3917", %archivePrefix = "arXiv", %primaryClass = "nucl-ex", %SLACcitation = "%%CITATION = ARXIV:0711.3917;%%", @article{Lim:2014fga, author = "Lim, Sanghoon", title = "{PHENIX recent heavy flavor results}", collaboration = "PHENIX collaboration", year = "2014", eprint = "1402.7147", archivePrefix = "arXiv", primaryClass = "nucl-ex", SLACcitation = "%%CITATION = ARXIV:1402.7147;%%", } @article{Adler:2006wg, author = "Adler, S.S. and others", title = "{Centrality dependence of charged hadron production in deuteron + gold and nucleon + gold collisions at s(NN)**(1/2) = 200-GeV}", collaboration = "PHENIX Collaboration", journal = "Phys.Rev.", volume = “C77", pages = "024912", doi = "10.1103/PhysRevC.77.024912", year = "2008", eprint = "0711.3917", archivePrefix = "arXiv", primaryClass = "nucl-ex", SLACcitation = "%%CITATION = ARXIV:0711.3917;%%", }

  5. Formatting titles for bibliographies in documents $\sqrt{s_{_{NN}}}$ sqrt(s_NN) s(NN)**(1/2) Bibliographies with full titles properly formatted can involve a lot of tedious hand-work, as the TeX for the title is sometimes not so good. (DPM: my impression is that this has improved in the last couple of years.) Crafted (hacked?) perl script back in 2011 using bibsonomy (http://www.bibsonomy.org/) as intermediary to get better TeX for the title directly from the journal web sites and replace one provided in INSPIRE’s BibTex entry. Positive interaction with Mike Sullivan via INSPIRE’s email help.

  6. Author identification • have been instances where similar author names have led to confusion even for us L. Donald Isenhower  D. Isenhower Larry D. Isenhower  L. Isenhower • recent meeting with INSPIRE team ⇒ Heath O’Connell (FNAL) sent us author.xml file for all PHENIX authors • doesn’t require action by authors themselves (good!) • adding to our internal author schema • need to understand interoperability with ORCID

  7. How else do we use INSPIRE?

  8. Cumulative citation history select date, max(r) from (select r1.date, row_number() over (order by r1.date) as r from (select a.date, c.citer, c.citee from articles a, cites c where a.recid = c.citer) as r1, articles b where r1.citee = b.recid) as r2 group by date)

  9. And it’s not just take, take, take … https://github.com/indico/indico/blame/master/indico/MaKaC/common/indexes.py … OK, it’s just one line out of O(105), but it’s a start.

  10. HepData Research data for 20 PHENIX publications uploaded so far, only 110 to go. Good recent exchange with Graeme Watt (Durham), leading to links being added to documented HepData input file format.

  11. csv output for HepData would be useful plots below using R (2 lines of code), gnuplot (3 lines), excel (a few clicks). xval, xerrm, xerrp, yval, yerrm, yerrp 0.005149, 5.510000000000003E-4, 5.49E-4, 465.0, 34.20526275297414, 34.20526275297414 0.006498, 8.019999999999998E-4, 7.980000000000001E-4, 465.0, 23.706539182259394, 23.706539182259394 0.008177, 8.819999999999991E-4, 8.770000000000002E-4, 437.5, 19.7436065600994, 19.7436065600994 0.009945, 8.95E-4, 8.860000000000014E-4, 411.0, 18.004999305748388, 18.004999305748388 0.01173, 8.999999999999998E-4, 8.900000000000002E-4, 402.3, 17.541379649275026, 17.541379649275026 0.01354, 9.099999999999994E-4, 9.099999999999994E-4, 384.5, 16.70359242797788, 16.70359242797788 0.01537, 9.199999999999989E-4, 9.200000000000007E-4, 378.0, 16.376812876747415, 16.376812876747415 0.01721, 9.300000000000003E-4, 9.200000000000007E-4, 360.3, 15.57080601638849, 15.57080601638849 R excel gnuplot

  12. Searching the PHENIX “intranet” • considered Invenio, but at the time seemed to be purely a metadata indexer/searcher • collaboration-sensitive documents, varied formats, desire for full text search, potential to index PHENIX documents at other sites, led to nutch (crawler) + Solr (indexer/searcher) + Drupal (web interface). • not trivial to setup properly (firewalls, shibboleth)

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