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Practical aspects of multi-core job submission at CERN

Practical aspects of multi-core job submission at CERN. Ricardo Silva CERN IT-FIO-FS. The batch system at CERN. Platform LSF In general no free capacity in the public SLC4 resources (> 10k pending jobs) But there are significant unused dedicated resources. Job slot model .

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Practical aspects of multi-core job submission at CERN

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  1. Practical aspects of multi-core job submission at CERN Ricardo Silva CERN IT-FIO-FS

  2. The batch system at CERN • Platform LSF • In general no free capacity in the public SLC4 resources (> 10k pending jobs) • But there are significant unused dedicatedresources Practical aspects of multi-core job submission at CERN - 2

  3. Job slot model • As a general rule we have one job slot per core + 1: in a 8 core machine 9 job slots (2 CPUs, 4 cores per CPU) • Resource allocations (i.e. memory) are based on a job slot model:2 GB RAM / core Practical aspects of multi-core job submission at CERN - 3

  4. Submitting multi-core jobs (1) • Without telling the system about it: bsub my_8thread_job.sh • Only 1 job slot is allocated to the job • 1 core / 2GB of RAM • There are other 7 jobs running on the same 8 cores, the machine will be quickly overloaded • LSF will stop scheduling new jobs to any machine if the utilization (load) is above a certain threshold • No new jobs will be started on the machine until the utilization is below the threshold again, but these job slots will be reported as “free” (implications for WLCG) • The jobs will be killed based on the resource limits defined for 1 job slot (at CERN this happens at 4GB at the moment) Practical aspects of multi-core job submission at CERN - 4

  5. Submitting multi-core jobs (2) • And telling the system about it: bsub –n 8 –span[hosts=1] my_8thr_job.sh • 8 job slots are allocated to the job • 8 cores / 16 GB of RAM • The –span option ensures the 8 job slots/CPUs are in the same node) • LSF knows the job wants to use the 8 cores and will start reserving cores on the same node before starting the job. • The job slots will be marked as being used Practical aspects of multi-core job submission at CERN - 5

  6. Conclusions • The system is already capable of correctly handling multi-core jobs, if it knows how many cores the job needs • Our experience supporting these jobs is very limited • We need to understand the effects of large numbers of multi-core jobs on the scheduling (there is the possibility of wasting resources). We will need to tune the scheduling parameters. • For effective backfilling we need accurateruntime estimation (users should use -We option) • LSF is in principle also capable of supporting MPI applications but the system is not optimized (ex: infrastructure, GB ethernet) Practical aspects of multi-core job submission at CERN - 6

  7. Questions? Practical aspects of multi-core job submission at CERN - 7

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