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Randomness Testing in DNA Samples

Randomness Testing in DNA Samples. Laura Jean Champagne Advisor: Gary Davis. Abstract.

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Randomness Testing in DNA Samples

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  1. Randomness Testing in DNA Samples Laura Jean Champagne Advisor: Gary Davis

  2. Abstract • This project examines the randomization of DNA sequences based on current genome sequencing projects. Using computational programs, mainly R and MATLAB, different mathematical tests for randomness are applied to DNA sequences in an attempt to find patterns or other unique properties. DNA sequences used are obtained from the Virtual Library of Genetics.

  3. AMELY & AMELX • Amelogenin (tooth enamel protein) • Gender Specific

  4. Data – GenBank

  5. Data

  6. Correlagram

  7. Correlagram AMELX AMELY

  8. DNA Sequences

  9. Histogram AMELX AMELY

  10. Histogram of Amino Acids AMELX AMELY

  11. Why Bother? • Synthetic life • Gender differences

  12. Goals • Relative Frequency

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