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Current situation Identify packages needed Applications (eg. Blast) Tools (eg., Bio*) PowerPoint Presentation
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Current situation Identify packages needed Applications (eg. Blast) Tools (eg., Bio*) - PowerPoint PPT Presentation


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Current situation Identify packages needed Applications (eg. Blast) Tools (eg., Bio*) Suits (eg. EMBOSS) Download “open-source” packages Install them Dependency issues Consistency (paths) Documents Interface (web,X) & Integration (piping) “Red Hat” for bioinformatics ?.

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Current situation Identify packages needed Applications (eg. Blast) Tools (eg., Bio*)


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Presentation Transcript
slide2
Current situation
  • Identify packages needed

Applications (eg. Blast)

Tools (eg., Bio*)

Suits (eg. EMBOSS)

  • Download “open-source” packages
  • Install them

Dependency issues

Consistency (paths)

Documents

  • Interface (web,X) & Integration (piping)

“Red Hat” for bioinformatics ?

slide3

Biolinux Concept

  • Open-source
  • Set of “essential” bioinformatics tools released in rpm format
  • Initial rpms made for blast, alignment, phylogenetics, ..
  • Interface and Integration (PISE/HTML::MASON)
  • Documentation
    • Demo database(s)
    • Manuals/Wizards
slide4

Released soon

http://biolinux.org

Helping hands:

info@biolinux.org

wim@bioinformatrix.com