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Comparison of MethyLight and Gene Expression Data Analysis

This figure shows comparisons of MethyLight PMR values against log2 gene expression values obtained from Affymetrix Human Genome U133 Plus 2.0 Arrays. Linear fit equation, correlation coefficient, and MethyLight reaction locations are provided relative to Reference Sequence transcripts.

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Comparison of MethyLight and Gene Expression Data Analysis

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  1. Supplementary Figure 4. Comparisons of MethyLight and gene expression data. PMR values (X-axis) were plotted against log2 gene expression values (Y-axis) obtained from analyses on Affymetrix Human Genome U133 Plus 2.0 Arrays. The equation for a linear fit of the data and correlation coefficient are provided along with the location of the MethyLight reaction relative to the proximal NCBI-designated Reference Sequence (RefSeq) transcript.

  2. HB-266 is 287-bp upstream of start REFSEQ NM_000484

  3. HB-266 is 287-bp upstream of start REFSEQ NM_000484

  4. HB-266 is 287-bp upstream of start REFSEQ NM_000484

  5. HB-249 is 9-bp upstream of start REFSEQ NM_000044

  6. HB-258 is in exon 99-bp downstream of start REFSEQ NM_001709

  7. HB-258 is in exon 99-bp downstream of start REFSEQ NM_001709

  8. HB-363 is 32-bp upstream of start REFSEQ NM_004052

  9. HB-363 is 32-bp upstream of start REFSEQ NM_004052

  10. HB-166 is 93-bp upstream of start REFSEQ NM_001033953

  11. HB-166 is 93-bp upstream of start REFSEQ NM_001033953

  12. HB-146 is 168-bp upstream of start REFSEQ NM_053056

  13. HB-146 is 168-bp upstream of start REFSEQ NM_053056

  14. HB-075 is in exon 132-bp downstream of start REFSEQ NM_001257

  15. HB-075 is in exon 132-bp downstream of start REFSEQ NM_001257

  16. HB-328 is in exon 168-bp downstream of start REFSEQ NM_000076

  17. HB-328 is in exon 168-bp downstream of start REFSEQ NM_000076

  18. HB-329 is in exon 986-bp downstream of start REFSEQ NM_000076

  19. HB-329 is in exon 986-bp downstream of start REFSEQ NM_000076

  20. HB-081 is in exon 306-bp downstream of start REFSEQ NM_058197

  21. HB-081 is in exon 306-bp downstream of start REFSEQ NM_058197

  22. HB-173 is in exon 332-bp downstream of start REFSEQ NM_004936

  23. HB-195 is in exon 4-bp downstream of start REFSEQ NM_001804

  24. HB-480 is 247-bp upstream of start REFSEQ NM_001806

  25. HB-480 is 247-bp upstream of start REFSEQ NM_001806

  26. HB-310 is in exon 57-bp downstream of start REFSEQ NM_001307

  27. HB-193 is in exon 342-bp downstream of start REFSEQ NM_000089

  28. HB-197 is in exon 37-bp downstream of start REFSEQ NM_004378

  29. HB-054 is 97-bp upstream of start REFSEQ NM_001338

  30. HB-054 is 97-bp upstream of start REFSEQ NM_001338

  31. HB-054 is 97-bp upstream of start REFSEQ NM_001338

  32. HB-223 is in intron 512-bp downstream of start REFSEQ NM_000785

  33. HB-218 is in exon 266-bp downstream of start REFSEQ NM_006094

  34. HB-218 is in exon 266-bp downstream of start REFSEQ NM_006094

  35. HB-048 is in exon 385-bp downstream of start REFSEQ NM_013238

  36. HB-048 is in exon 385-bp downstream of start REFSEQ NM_013238

  37. HB-252 is 463-bp upstream of start REFSEQ NM_000794

  38. HB-164 is in exon 143-bp downstream of start REFSEQ NM_000125

  39. HB-164 is in exon 143-bp downstream of start REFSEQ NM_000125

  40. HB-164 is in exon 143-bp downstream of start REFSEQ NM_000125

  41. HB-164 is in exon 143-bp downstream of start REFSEQ NM_000125

  42. HB-442 is 21-bp upstream of start REFSEQ NM_001039706

  43. HB-254 is 423-bp upstream of start REFSEQ NM_000807

  44. HB-255 is 847-bp upstream of start REFSEQ NM_000817

  45. HB-255 is 847-bp upstream of start REFSEQ NM_000817

  46. HB-327 is 371-bp upstream of start REFSEQ NM_001002295

  47. HB-323 is in intron 394-bp downstream of start REFSEQ NM_002052

  48. HB-323 is in intron 394-bp downstream of start REFSEQ NM_002052

  49. HB-323 is in intron 394-bp downstream of start REFSEQ NM_002052

  50. HB-324 is in exon 3625-bp downstream of start REFSEQ NM_002052

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