'Metabolic networks' presentation slideshows

Weighted networks: analysis, modeling A. Barrat, LPT, Université Paris-Sud, France

Weighted networks: analysis, modeling A. Barrat, LPT, Université Paris-Sud, France. M. Barthélemy (CEA, France) R. Pastor-Satorras (Barcelona, Spain) A. Vespignani (LPT, France). cond-mat/0311416 PNAS 101 (2004) 3747 cond-mat/0401057 PRL 92 (2004) 228701

888 views • 77 slides

Modeling metabolic networks: Advantages and limitations of approximated mathematical formalisms

674 views • 55 slides

Complex (Biological) Networks

Complex (Biological) Networks. Analyzing Metabolic Networks. Elhanan Borenstein Spring 2010. Some slides are based on slides from courses given by Roded Sharan and Tomer Shlomi. Metabolism.

557 views • 40 slides

An Introduction of Complex networks

An Introduction of Complex networks. Zhao Jing 2006.11.22 Zjane_cn@sjtu.edu.cn. Outline I. Network metrics and topological features II. Modularity and network decomposition III. Topological diversity of networks with a given degree sequence. I. Network metrics and topological features.

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Basic Data Structures for Graph based Visualization and Analysis of Metabolic Networks

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Large-scale organization of metabolic networks Jeong et al.

Large-scale organization of metabolic networks Jeong et al. CS 466 Saurabh Sinha. Complex network in cell. Cellular processes generating mass & energy, transfering information, specifying cell fate Integrated through complex network of several constituents and reactions

388 views • 31 slides

Nathan Price Department of Chemical & Biomolecular Engineering

Integrated Regulatory-Metabolic N etwork Construction using Probabilistic Regulation of Metabolism (PROM). Nathan Price Department of Chemical & Biomolecular Engineering Center for Biophysics & Computational Biology Institute for Genomic Biology University of Illinois, Urbana-Champaign

456 views • 28 slides

Random Networks: Scale-free Networks

500 views • 28 slides

S tefano Boccaletti Complex networks in science and society

S tefano Boccaletti Complex networks in science and society. * Istituto Nazionale di Ottica Applicata - Largo E. Fermi, 6 - 50125 Florence, ITALY *CNR-Istituto dei Sistemi Complessi * MIND- Mediterranean Institute for Nonlinear Dynamics. Coworkers:

428 views • 28 slides

From gene expression to metabolic fluxes.

359 views • 23 slides

Metabolic Flux Analysis of Lactic AcidFermentation : Effects of pH and Lactate ion Concentration

Metabolic Flux Analysis of Lactic AcidFermentation : Effects of pH and Lactate ion Concentration By. K.V.Venkatesh Department Of Chemical Engineering, Indian Institute Of Technology, Bombay Paper Reviewed For Understanding the Metabolic Networks Analysis is

374 views • 20 slides

Metabolic networks

Metabolic networks. Guest lecture by Dr. Carlotta Martelli 26_10_2007. ( ... ) coa + nad + pyr --> accoa + co2 + nadh g1p + h2o --> glc-D + pi 2pg <==> h2o + pep g3p + nad +pi <==> 13dpg + h + nadh fdp <==> dhap + g3p fdp + h2o --> f6p + pi f6p <==> dha + g3p

368 views • 20 slides

Adaptive evolution of bacterial metabolic networks by horizontal gene transfer

Adaptive evolution of bacterial metabolic networks by horizontal gene transfer. Chao Wang Dec 14, 2005. Pal C, Papp B, Lercher MJ. Adaptive evolution of bacterial metabolic networks by horizontal gene transfer. Nat Genet. 2005 Dec; 37(12):1372-5. The issues.

323 views • 18 slides

Graph-oriented modelling of multiscaled dynamical systems with a dynamical structure:

Graph-oriented modelling of multiscaled dynamical systems with a dynamical structure: Challenges to the "Relational Growth Grammar" approach Winfried Kurth Brandenburg University of Technology at Cottbus, Chair for Practical Computer Science / Graphics Systems.

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Sharlene C. Weatherwax, Ph.D. Director Biological Systems Science Division

BERAC Meeting Biological Systems Science Division Update. Sharlene C. Weatherwax, Ph.D. Director Biological Systems Science Division Biological & Environmental Research Office of Science February 18, 2009. Science Focus Areas (SFAs) include: GTL Fundamental Science GTL Biofuels Low Dose

307 views • 16 slides

Large-Scale Metabolic Network Alignment: MetaCyc and KEGG

282 views • 13 slides

BIOINFORMATICS ON NETWORKS

University of Illinois at Urbana-Champaign. BIOINFORMATICS ON NETWORKS. Nick Sahinidis. Chemical and Biomolecular Engineering. MOTIVATION. Genomics and proteomics help us understand the structure, properties, and function of single genes and proteins

196 views • 12 slides

Types of Cellular Networks

Types of Cellular Networks. Gene Regulatory Networks. http://scienceblogs.com/pharyngula/2006/06/modules_and_the_promise_of_the.php. Gene Regulatory Network Basic Operations. Protein Signaling Networks. http://www.nature.com/msb/journal/v2/n1/full/msb4100088.html.

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Abstract

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The BioCyc Collection of Pathway/Genome Databases

The BioCyc Collection of Pathway/Genome Databases. Alexander Shearer Bioinformatics Research Group SRI International shearer@ai.sri.com BioCyc.org EcoCyc.org MetaCyc.org HumanCyc.org. Pathway Tools Software. PathoLogic

192 views • 6 slides