UCSC Archaeal genome browser Advanced browsing. September 19, 2006 David Bernick , Aaron Cozen and Todd Lowe. Agenda. Basic searches with the Archaea Genome browser Text searches Sequence searching - BLAT, short sequences In-silico PCR Hands-on session - Navigation and searching
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September 19, 2006
David Bernick, Aaron Cozen and Todd Lowe
Typically used for text based queries
Which tRNA genes in Pyrococcus furiosus have an overlap with an annotated protein coding region?
2 step query:
select all Refseq annotated coding regions
intersect this group with tRNA annotated regions