Demo: Exploiting the UCSC Genome Browser. Stefanie Butland UBC Bioinformatics Centre [email protected] Database. UCSC Genome Gateway Structure. Custom tracks. Genome browser. Table browser. Your sequence. BLAT. Family browser. Downloadable files
Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author.While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server.
Table Browser and Custom Tracks
Tabular output of simple repeats in QARS
Research Question: Which known genes in the first 25 Mb of chromosome 4 contain trinucleotide repeats?
An answer to this question can be found in the intersection of the Known Genes table with the Simple Repeats table (limited to repeat period = 3) in the region chr4:1-25,000,000
Research Question: turn the Simple Repeats track on in pack mode to view these
Which known genes in the first 25 Mb of chromosome 4 contain trinucleotide repeats?
. . . turn the Simple Repeats track on in pack mode to view theseData Downloads http://genome.ucsc.edu/downloads.html
For other examples to work through, see: