Leveraging Propagation for Data Mining Models, Algorithms & Applications
Leveraging Propagation for Data Mining Models, Algorithms & Applications. B. Aditya Prakash Naren Ramakrishnan. August 10, Tutorial, SIGKDD 2016, San Francisco. About us. B. Aditya Prakash Asst. Professor CS, Virginia Tech. PhD. CMU, 2012. Data Mining, Applied ML
Leveraging Propagation for Data Mining Models, Algorithms & Applications
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Leveraging Propagation for Data MiningModels, Algorithms & Applications B. Aditya Prakash NarenRamakrishnan August 10, Tutorial, SIGKDD 2016, San Francisco
About us • B. Aditya Prakash • Asst. Professor • CS, Virginia Tech. • PhD. CMU, 2012. • Data Mining, Applied ML • Graph and Time-series mining • Applications to Social Media, Epidemiology/Public Health, Cyber Security • Homepage: http://www.cs.vt.edu/~badityap/ Prakash and Ramakrishnan 2016
About us • NarenRamakrishnan • Thomas L. Phillips Prof. • CS, Virginia Tech. • PhD. Purdue, 1997. • Data mining • for intelligence analysis, forecasting, sustainability, and health informatics • Homepage: http://people.cs.vt.edu/naren/ Prakash and Ramakrishnan 2016
Tutorial webpage • http://people.cs.vt.edu/~badityap/TALKS/16-kdd-tutorial/ • All Slides will be posted there. • Talk video as well (later). Prakash and Ramakrishnan 2016
Networks are everywhere! Facebook Network [2010] Gene Regulatory Network [Decourty 2008] Human Disease Network [Barabasi 2007] The Internet [2005] Prakash and Ramakrishnan 2016
Dynamical Processes over networks are also everywhere! Prakash and Ramakrishnan 2016
Why do we care? • Social collaboration • Information Diffusion • Viral Marketing • Epidemiology and Public Health • Cyber Security • Human mobility • Games and Virtual Worlds • Ecology • ........ Prakash and Ramakrishnan 2016
Why do we care? (1: Epidemiology) • Dynamical Processes over networks [AJPH 2007] CDC data: Visualization of the first 35 tuberculosis (TB) patients and their 1039 contacts Diseases over contact networks Prakash and Ramakrishnan 2016
Why do we care? (1: Epidemiology) • Dynamical Processes over networks • Each circle is a hospital • ~3000 hospitals • More than 30,000 patients • transferred [US-MEDICARE NETWORK 2005] Problem: Given k units of disinfectant, whom to immunize? Prakash and Ramakrishnan 2016
Why do we care? (1: Epidemiology) ~6x fewer! [US-MEDICARE NETWORK 2005] CURRENT PRACTICE OUR METHOD Hospital-acquired inf. took 99K+ lives, cost $5B+ (all per year) Prakash and Ramakrishnan 2016
Why do we care? (2: Online Diffusion) > 800m users, ~$1B revenue [WSJ 2010] ~100m active users > 50m users Prakash and Ramakrishnan 2016
Why do we care? (2: Online Diffusion) • Dynamical Processes over networks Buy Versace™! Followers Celebrity Social Media Marketing Prakash and Ramakrishnan 2016
Why do we care? (3: To change the world?) • Dynamical Processes over networks Social networks and Collaborative Action Prakash and Ramakrishnan 2016
High Impact – Multiple Settings epidemic out-breaks Q. How to squash rumors faster? Q. How do opinions spread? Q. How to market better? products/viruses transmit s/w patches Prakash and Ramakrishnan 2016
Research Theme ANALYSIS Understanding POLICY/ ACTION Managing DATA Large real-world networks & processes Prakash and Ramakrishnan 2016
Research Theme – Public Health ANALYSIS Will an epidemic happen? POLICY/ ACTION How to control out-breaks? DATA Modeling # patient transfers Prakash and Ramakrishnan 2016
Research Theme – Social Media ANALYSIS # cascades in future? POLICY/ ACTION How to market better? DATA Modeling Tweets spreading Prakash and Ramakrishnan 2016
In this tutorial Given propagation models, on arbitrary networks: Q1: What is the epidemic threshold? Q2: How do viruses compete? With extensions to dynamic networks, multi-profile networks etc. Fundamental Models Understanding Prakash and Ramakrishnan 2016
In this tutorial Q3: How to estimate and learn influence and networks? Q4: How to immunize and control out-breaks better? Q5: How to reverse-engineer epidemics? Q6: How to leverage viral marketing? Q7: How to pick sensors for graphs? Algorithms Managing/Manipulating Prakash and Ramakrishnan 2016
In this tutorial How to use propagation for _________ Q8: Memes, Tweets, Blogs Q9: Disease Surveillance Q10: Protest Trends Q11: Malware Attacks Q12: General Graph Mining Applications Large real-world networks & processes Prakash and Ramakrishnan 2016
Plan • Three breaks! • 2-2:05pm • 3-3:30pm (conference coffee break) • 4:15-4:20pm • Part 2: Algorithms starts at roughly 1:50pm • Part 3: Applications at 3:30pm (after the coffee break) • Please interrupt anytime for questions Prakash and Ramakrishnan 2016
Outline • Motivation • Part 1: Understanding Epidemics (Theory) • Part 2: Policy and Action (Algorithms) • Part 3: Applications (Data-Driven) • Conclusion Prakash and Ramakrishnan 2016
Part 1: Theory • Q1: What is the epidemic threshold? • Q2: How do viruses compete? Prakash and Ramakrishnan 2016
A fundamental question Strong Virus Epidemic? Prakash and Ramakrishnan 2016
example (static graph) Weak Virus Epidemic? Prakash and Ramakrishnan 2016
Problem Statement # Infected above (epidemic) below (extinction) time Separate the regimes? Find, a condition under which • virus will die out exponentially quickly • regardless of initial infection condition Prakash and Ramakrishnan 2016
Threshold (static version) Problem Statement • Given: • Graph G, and • Virus specs (attack prob. etc.) • Find: • A condition for virus extinction/invasion Prakash and Ramakrishnan 2016
Threshold: Why important? • Accelerating simulations • Forecasting (‘What-if’ scenarios • Design of contagion and/or topology • A great handle to manipulate the spreading • Immunization • Maximize collaboration ….. Prakash and Ramakrishnan 2016
Part 1: Theory • Q1: What is the epidemic threshold? • Background • Result and Intuition (Static Graphs) • Proof Ideas (Static Graphs) • Bonus: Dynamic Graphs • Q2: How do viruses compete? Prakash and Ramakrishnan 2016
Background “SIR” model: life immunity (mumps) • Each node in the graph is in one of three states • Susceptible (i.e. healthy) • Infected • Removed (i.e. can’t get infected again) Prob. β Prob. δ t = 1 t = 2 t = 3 Prakash and Ramakrishnan 2016
Background Terminology: continued • Other virus propagation models (“VPM”) • SIS : susceptible-infected-susceptible, flu-like • SIRS : temporary immunity, like pertussis • SEIR : mumps-like, with virus incubation (E = Exposed) ….…………. • Underlying contact-network – ‘who-can-infect-whom’ Prakash and Ramakrishnan 2016
Background Related Work • All are about either: • Structured topologies (cliques, block-diagonals, hierarchies, random) • Specific virus propagation models • Static graphs • R. M. Anderson and R. M. May. Infectious Diseases of Humans. Oxford University Press, 1991. • A. Barrat, M. Barthélemy, and A. Vespignani. Dynamical Processes on Complex Networks. Cambridge University Press, 2010. • F. M. Bass. A new product growth for model consumer durables. Management Science, 15(5):215–227, 1969. • D. Chakrabarti, Y. Wang, C. Wang, J. Leskovec, and C. Faloutsos. Epidemic thresholds in real networks. ACM TISSEC, 10(4), 2008. • D. Easley and J. Kleinberg. Networks, Crowds, and Markets: Reasoning About a Highly Connected World. Cambridge University Press, 2010. • A. Ganesh, L. Massoulie, and D. Towsley. The effect of network topology in spread of epidemics. IEEE INFOCOM, 2005. • Y. Hayashi, M. Minoura, and J. Matsukubo. Recoverable prevalence in growing scale-free networks and the effective immunization. arXiv:cond-at/0305549 v2, Aug. 6 2003. • H. W. Hethcote. The mathematics of infectious diseases. SIAM Review, 42, 2000. • H. W. Hethcote and J. A. Yorke. Gonorrhea transmission dynamics and control. Springer Lecture Notes in Biomathematics, 46, 1984. • J. O. Kephart and S. R. White. Directed-graph epidemiological models of computer viruses. IEEE Computer Society Symposium on Research in Security and Privacy, 1991. • J. O. Kephart and S. R. White. Measuring and modeling computer virus prevalence. IEEE Computer Society Symposium on Research in Security and Privacy, 1993. • R. Pastor-Santorras and A. Vespignani. Epidemic spreading in scale-free networks. Physical Review Letters 86, 14, 2001. • ……… • ……… • ……… Prakash and Ramakrishnan 2016
Part 1: Theory • Q1: What is the epidemic threshold? • Background • Result and Intuition (Static Graphs) • Proof Ideas (Static Graphs) • Bonus: Dynamic Graphs • Q2: How do viruses compete? Prakash and Ramakrishnan 2016
How should the answer look like? ….. • Answer should depend on: • Graph • Virus Propagation Model (VPM) • But how?? • Graph – average degree? max. degree? diameter? • VPM – which parameters? • How to combine – linear? quadratic? exponential? Prakash and Ramakrishnan 2016
Static Graphs: Our Main Result • Informally, • For, • any arbitrary topology (adjacency • matrix A) • any virus propagation model (VPM) in • standard literature • the epidemic threshold depends only • on the λ,firsteigenvalueof A,and • some constant , determined by the virus propagation model λ • No epidemic if λ * < 1 In Prakash+ ICDM 2011
Our thresholds for some models s = effective strength s < 1 : below threshold
Our result: Intuition for λ “Official” definition: “Un-official” Intuition λ ~ # paths in the graph • Let A be the adjacency matrix. Then λ is the root with the largest magnitude of the characteristic polynomial of A [det(A – xI)]. • Doesn’t give much intuition! u u ≈ . (i, j) = # of paths i j of length k Prakash and Ramakrishnan 2016
Largest Eigenvalue (λ) better connectivity higher λ λ ≈ 2 λ = N λ = N-1 λ ≈ 2 λ= 31.67 λ= 999 N = 1000 N nodes Prakash and Ramakrishnan 2016
Examples: Simulations – SIR (mumps) Fraction of Infections Footprint (a) Infection profile (b) “Take-off” plot PORTLAND graph 31 million links, 6 million nodes Effective Strength Time ticks
Examples: Simulations – SIRS (pertusis) Fraction of Infections Footprint (a) Infection profile (b) “Take-off” plot PORTLAND graph 31 million links, 6 million nodes Time ticks Effective Strength
Part 1: Theory • Q1: What is the epidemic threshold? • Background • Result and Intuition (Static Graphs) • Proof Ideas (Static Graphs) • Bonus: Dynamic Graphs • Q2: How do viruses compete? Prakash and Ramakrishnan 2016
Proof Sketch General VPM structure Model-based λ * < 1 Graph-based Topology and stability Prakash and Ramakrishnan 2016
Models and more models Prakash and Ramakrishnan 2016
Ingredient 1: Our generalized model Endogenous Transitions Endogenous Transitions Susceptible Susceptible Infected Infected Exogenous Transitions Vigilant Vigilant Endogenous Transitions Prakash and Ramakrishnan 2016
Special case: SIR Susceptible Infected Vigilant Prakash and Ramakrishnan 2016
Special case: H.I.V. “Non-terminal” “Terminal” Multiple Infectious, Vigilant states Prakash and Ramakrishnan 2016
Details Ingredient 2: NLDS + Stability size N (number of nodes in the graph) S • Probability vector Specifies the state of the system at time t . . . size mNx 1 I V . . . . . • View as a NLDS • discrete time • non-linear dynamical system (NLDS) Prakash and Ramakrishnan 2016
Details Ingredient 2: NLDS + Stability Non-linear function Explicitly gives the evolution of system . . . size mNx 1 . . . . . • View as a NLDS • discrete time • non-linear dynamical system (NLDS) Prakash and Ramakrishnan 2016
Ingredient 2: NLDS + Stability • View as a NLDS • discrete time • non-linear dynamical system (NLDS) • Threshold Stability of NLDS Prakash and Ramakrishnan 2016
Details Special case: SIR S S size 3Nx1 I I R R = probability that node iis not attacked by any of its infectious neighbors NLDS Prakash and Ramakrishnan 2016