Next Generation Sequencing - Visualization - Arif Hossain Kyung Min Su
Content Visualization Issues NGSView Tablet
Visualization Issues • Huge Data • Various Format • Rendering and Navigation • Extensibility
NGSView • Berkeley DB engine • Front end converter • XML format • Open and Documented API • http://ngsview.sourceforge.net
Tablet High-performance visualization and data navigation. Display of reads in both packed and stacked formats. Paired end visualization support. File format support for ACE, AFG, MAQ, SOAP2, SAM and BAM. Search and locate reads by name across entire data sets. Support for Windows, Apple Mac OS X, Linux and Solaris, in 32 and 64-bit.
Question? NGSView http://ngsview.sourceforge.net Tablet http://bioinf.scri.ac.uk/tablet