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Microbio entry in XD-LAB: The issue. <entry> <act>. <specimen> : the subject of this study (e.g. a sputum). Direct and/or Microscopic examination < organizer classCode =« BATTERY »>. Observation 1. Observation 2. Aerobic culture < organizer classCode =« BATTERY »>.

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<entry> <act>

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  1. Microbio entry in XD-LAB: The issue <entry> <act> <specimen> : the subject of this study (e.g. a sputum) Direct and/or Microscopicexamination<organizerclassCode=« BATTERY »> Observation 1 Observation 2 Aerobic culture <organizerclassCode=« BATTERY »> Observation 1 : positive Obs 2 : 1st microorganism : staph.aur Obs 3 : 2nd microorganism : bact.fr Anaerobic culture <organizerclassCode=« BATTERY »> Observation 1 : positive Observation 2 : 1st microorganism : staph.aur Which one is it? Findings on one isolate<organizerclassCode=« CLUSTER »> <specimen> : « staph.aur » (the isolate) Obs : concentration Antiobiogram<organizerclassCode=« BATTERY »> Antibiotic 1 Antibiotic 2

  2. Microbio entry in XD-LAB: Solution a) with <qualifiers> <entry> <act> <specimen> : the subject of this study (e.g. a sputum) Direct and/or Microscopicexamination<organizerclassCode=« BATTERY »> Observation 1 Aerobic culture <organizerclassCode=« BATTERY »> Obs 1 : positive Obs 2 : 1st microorganism : staph.aur Anaerobic culture <organizerclassCode=« BATTERY »> Obs 1 : positive Obs2 : microorganism = staph.aur Findings on isolate<organizerclassCode=« CLUSTER »> This is the one! <specimen> : « staph.aur » (the isolate) <specimenRole classCode="ISLT"> <specimenPlayingEntity classCode="MIC"> <code code="----------" codeSystem="2.16.840.1.113883.6.96" codeSystemName="SNOMED-CT" displayName="Staph.aur"> <qualifier> <name code="-----" codeSystem="2.16.840.1.113883.6.96"  displayName="culture"/> <value code="------" codeSystem="2.16.840.1.113883.6.96"  displayName=" aerobic"/> </qualifier> </code> Obs : concentration Antiobiogram<organizerclassCode=« BATTERY »>

  3. Microbio entry in XD-LAB: Solution b) : structural change (CP) Microbio entry in XD-LAB: The issue <entry> <act> <specimen> : the subject of this study (e.g. a sputum) Direct and/or Microscopicexamination<organizerclassCode=« BATTERY »> Observation 1 Observation 2 Aerobic culture <organizerclassCode=« BATTERY »> Observation 1 : positive Obs 2 : 1st microorganism : staph.aur Obs 3 : 2nd microorganism : bact.fr Here’s the one ! Findings on one isolate<organizerclassCode=« CLUSTER »> <specimen> : « staph.aur » (the isolate) Obs : concentration Antiobiogram<organizerclassCode=« BATTERY »> Antibiotic 1 Antibiotic 2 Anaerobic culture <organizerclassCode=« BATTERY »> Observation 1 : positive Observation 2 : 1st microorganism : staph.aur Findings on one isolate<organizerclassCode=« CLUSTER »>

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