Analysis of Protein Identification and mRNA Abundance Frequency in All Proteins - Supplementary Figure 1

Jun 30, 2025

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This study examines the frequency of protein identification and mRNA abundance across all proteins, represented in log-scale values. The Supplementary Figure 1 provides a visual representation of the data.

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protein identification
mrna abundance
frequency analysis
log scale

gretel

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Analysis of Protein Identification and mRNA Abundance Frequency in All Proteins - Supplementary Figure 1

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0.5 DVU all proteins 0.4 Proteins identified 0.3 Frequency 0.2 0.1 0 0~1 1~2 2~3 3~4 4~5 5~6 6~7 7~8 8~9 9~10 10~11 mRNA abundance (log scale) Supplementary Figure 1

Supplementary figure 1

Supplementary figure 1. Supplementary figure 2 . sNF96.2. ST88-14. T265-2C. NF90.8. Supplementary figure 3. NF90.8. sNF96.2. T265-2C. ST88-14. Supplementary figure 4. A. B. NF90.8. siRNA mTOR#13. siRNA mTOR#19. siRNA GFP. mTOR. GAPDH. ST88-14. siRNA mTOR#13.

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Supplementary Figure 1

Supplementary Figure 1. MW/1000. pH. SJIA. POLY. Others. F. FI. F. KD. Q. Q. C3. AGP1. ACT. SAP. SAA. S100A8. S100A9. HP. CRP. C9. C4. APO-IV. APO-L1. AMBP. KLKB1. VDB. CFH. ATIII. A2M. ATIII. APO-E. APO-D. FGG FGB. TTR. GSN. APOA1. Figure 1. 12. 10. 8.

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Supplementary Figure 1

Supplementary Figure 1. A. B. C. Supplementary Figure 2. Supplementary Figure 3. A. PHTX-14B Day 10. B. MDA-MB-231 Day 10. Supplementary Figure 4. Vehicle. MLN8237 20mg/kg QDx3/wk. Treatment Period. 2500. 2000. 1500. Average Tumor Volume (mm^3). 1000. 500. 0. 0. 10. 20.

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Supplementary Figure 1

Supplementary Figure 1. 3. 2,5. 2. 1,5. 1. 0,5. 0. 6. 5. 4. 3. 2. 1. 0. A. WT with FSK+Gen. WT with FSK. lF508del with FSK+Gen. lF508del with FSK. ns. ns. ns. ns. Bicarbonate secretion ( normalized to the rate in FSK-treated F508del as 1). 10 min post peak response.

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Supplementary Figure 1

Supplementary Figure 1. a. b. c. a continuous schedule for 35 consecutive days. an intermittent schedule. DNA vaccination (50 ug/mouse). DNA vaccination (50 ug/mouse). A20 Lymphoma. A20 Lymphoma. Day. Day. 1. 35. 0. 14. 28. 0. 14. 28. 42. 21. 18. 35. 42. 32. 7. 4.

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Supplementary Figure 1

a. *. *. ns. 3. 2. RANK Arbitrary Score. 1. 0. b. RANK. 1 2 3 4 5 6 7 8 9 10 11. Metastasis lymph node. Primary tumor. Normal breast. Supplementary Figure 1. Prolactin. RANKL. RANKL. pERK1/2. pERK1/2. pAKT. ERK1/2. AKT. b -Actin. pSTAT5. STAT5.

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Supplementary Figure 1

Supplementary Figure 1. HM466934. I. II. pre-A. A. B. C. D/E. Supplementary Figure 2. V. IV. HM466934. HM466934. VI. HM466934. Supplementary Figure 3. HM466935. CDUV. Supplementary Figure 4. 34. MRMBV. MRCV. TUAV. ORXV. ALEV.

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Supplementary Figure 1

IgVH unmutated. IgVH mutated. Low-risk. Intermediate-risk. High-risk. P14 cluster. N6 cluster. ZAP-70. CD38. IgVH status. Supplementary Figure 1.

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Supplementary Figure 1

Supplementary Figure 1. CEPH: CYP2C8 (40kb, chr10:96782845..96822844). MAF=0.05. B. Hap-B. Hap-E. Hap-F. Haplotypes above 2%. Hap-A. Hap-D. Hap-C1+C2. Hap-C3. 3´UTR. CYP2C8. Pr. A. JPT+HCB: Asian. YRI: African. Supplementary Figure 2. A. B. C. A. B. C. Hap D (*3). Hap B.

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Supplementary Figure 1

A. B. D. C. E. CD20. CagA. Merge. DAPI. Supplementary Figure 1.

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Supplementary Figure 1

Nephrin. Nephrin. Nephrin. Nephrin. Nephrin. Synaptopodin. Synaptopodin. Synaptopodin. Synaptopodin. Synaptopodin. A. Merge. Merge. Merge. Merge. Merge. B. Podocin. Podocin. Podocin. Podocin. Podocin. Day 28. Control. Day 3. Day 15. Day 7. ADRN 11 mg/kg. Cont. Day3.

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Supplementary Figure 1

Supplementary Figure 1. A. MIG (pMSCV-ires-GFP). I. GFP. LTR. LTR. MIG-PL2 (pMSCV-PLAGL2-ires-GFP). PL2. GFP. LTR. LTR. I. B. CBFb-MYH11 + HPs. GFP sort. Gene expression profile. Genes commonly deregulated in PL2+ cells. MIG-PL2 transduction. MIG transduction. GFP sort.

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Supplementary Figure 1

Supplementary Figure 1. A. B. C.

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Supplementary Figure 1.

MgrA. MepR. Supplementary Figure 1.

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Supplementary Figure 1

90. 85. 80. 75. 70. 65. 40. 44. 48. 52. 56. 90. 80. 70. 60. 50. 38. 40. 42. 44. 46. 48. 50. 52. 90. 80. 70. 60. 50. 40. 30. 25. 30. 35. 40. 45. 50. 55. Normal. r = 0.043. p = 0.678. Methylation Level of LINE1 (%). Background. r = 0.063. p = 0.559.

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Supplementary Figure 1

Supplementary Figure 1. Nominal p-value =0.0 FDR q-value= 0.19. Nominal p-value =0.004 FDR q-value= 0.30. Nominal p-value =0.013 FDR q-value= 0.19. Nominal p-value =0.033 FDR q-value= 0.18. Nominal p-value = 0.007 FDR q-value= 0.18. Nominal p-value =0.075 FDR q-value= 0.19.

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Supplementary Figure 1

Supplementary Figure 1. Venkatachalam et al. 2013. ab. a. ab. abc. c. 24 48 72 96 120. Hours after FB17 treatment. Supplementary Figure 2. Venkatachalam et al. 2013. At1g11610. At3g28360. At1g21240. At3g14460. At3g20190. UBQ1.

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Supplementary Figure 1

Supplementary Figure 1. Expansion of MSCs in 20% oxygen vs 5% oxygen. Supplementary Figure 2. Expansion of Kaneka-filtered cells in Flasks (P4) and the Quantum (P2). Supplementary Figure 3. Adipogenesis. Osteogenesis. Chondrogenesis.

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Supplementary Figure 1

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Supplementary Figure 1

A. *. A average weight [g]. A average weight [g]. CR. CR. Control. Control. T ime of experiment [week s ]. T ime of experiment [week s ]. *p<0,05. B. Supplementary Figure 1.

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Supplementary Figure 1.

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Supplementary Figure 1

Bemmo et al. Supplementary Figure 1.

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