1 / 6

Viewpoint ( genepi.qimr.au/viewapps/)

Viewpoint ( http://genepi.qimr.edu.au/viewapps/). Plotting Program for Linkage Results Harry Beeby & Sarah Medland Queensland Institute of Medical Research. A quick and easy way to view linkage results. Two main types of plots Univariate Multivariate-Univariate comparison

druce
Download Presentation

Viewpoint ( genepi.qimr.au/viewapps/)

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript


  1. Viewpoint (http://genepi.qimr.edu.au/viewapps/) Plotting Program for Linkage Results Harry Beeby & Sarah Medland Queensland Institute of Medical Research

  2. A quick and easy way to view linkage results Two main types of plots • Univariate • Multivariate-Univariate comparison • Can view all chromosomes at once or one at a time

  3. Univariate Plots • Unlimited number of traits • Easy to customise • colours, line style, grid and reference lines

  4. Multivariate Plots • Compare univariate and multivariate results • Display path coefficients in ‘pop up’ windows

  5. Input format • Tab delimited • Univariate Plot Chromosome, Map distance, Marker name, LOD scores/Chi-squares • Multivariate Plot Chromosome, Map distance, Marker name, Univariate LOD score, Multivariate LOD score, Path coefficients (maximum of 10)

  6. To plot • Go to: File/open file • Select file • Specify Univariate or Multivariate • Customise using the Edit menu • Change axis tiles/ colours/ font size • Change line style/ width/ colour • Results can be printed or saved as jpg

More Related