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PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting

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PTAGIS System Review and Roadmap for the 2013 PIT Tag Steering Committee Annual Meeting. Summary of PTAGIS Data Processing for 2012. 2.8 million PIT-tagged fish released. 27 organizations. 336 release locations. Summary of PTAGIS Data Processing for 2012. 14+ million observations.

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slide1
PTAGIS System Review and Roadmap

for the

2013 PIT Tag Steering Committee Annual Meeting

summary of ptagis data processing for 2012
Summary of PTAGIS Data Processing for 2012

2.8million

PIT-tagged

fish

released

27organizations

336release

locations

summary of ptagis data processing for 20121
Summary of PTAGIS Data Processing for 2012

14+million

observations

1.06million

unique

tags

177interrogation

sites

2012 field data systems update
2012 Field Data Systems Update
  • P3: current version 1.5.1
    • Removed Tag Manufacturer's Code Validation per PTSC request
    • Support for Biomark HPR+ Portable Transceiver
  • MiniMon: current version 1.7.0
    • Removed Tag Manufacturer's Code Validation per PTSC request
    • Support for Biomark FS-2020 Adult Transceiver
  • M4: current version 1.5.1
    • SbyC features implemented and lab tested
    • Live fish test at GOJ confirmed lab testing
    • Site evaluation at GOJ, B2J, and BCC in June
    • High-availability features implemented and tested
    • Deployed to all PTAGIS-maintained sites for 2013 season
new ptagis website beta
New PTAGIS Website (Beta)
  • May 2012: Internal Release to Focus Group
  • October 2012: Public Release
  • January 2013: Update
website content management system as foundation
Website: Content Management System as Foundation
  • Manages online content such as documents, photos and videos
  • Manages users accounts and roles (tag coordinator, data steward, etc.)
  • Searching: tagged-based and full-text
  • Web page templates (support for mobile devices)
  • Newsletter creation, subscription and distribution
  • Email campaigns
ptagis4 data file extracts
PTAGIS4 Data File Extracts
  • File-based replica of the entire PTAGIS dataset
  • Replacement for TMT and Telnet features from PTAGIS3
  • Primarily for large data consumers such as FPC and DART
  • Files are downloaded and merged into another database
  • Updated nightly
  • Partitioned by periods of time, such as changes occurring
    • Yesterday
    • Last week
    • Last month
    • Last year
summary of querybuilder2 web report usage october 24 th 2012 to today
Summary of QueryBuilder2 Web Report Usage (October 24th 2012 to Today)

144users

ran

at least one

report

8,879jobs

run

225million

rows

returned

summary of querybuilder1 web report usage october 24 th 2012 to today
Summary of QueryBuilder1 Web Report Usage (October 24th 2012 to Today)

228users

ran

at least one

query

3,167queries

run

674million

rows

returned

2013 roadmap introduction
2013 Roadmap Introduction
  • PTAGIS3 Server and related components disabled by Oct. 2013
    • Ingres Database (license agreement requires uninstall)
    • Legacy Website and QueryBuilder
    • IDL and FDVL field data processing
    • O&M reports and tools (PTOC central)
    • Telnet and TMT files
    • Tag Distribution System
  • Requires complete transition to PTAGIS4 server
2013 roadmap interrogation data processing and o m reporting
2013 Roadmap: Interrogation Data Processing and O&M Reporting
  • Before 2013 Field Season (March 1):
  • All interrogation data to be processed in PTAGIS4 server
  • Disable any PTAGIS3 interrogation data source in PTAGIS4 reporting
  • PTAGIS3 interrogation data and reports will be used for reference only
  • Requires the following tasks to be completed:
    • Transform and load MiniMon data into PTAGIS4 for sites not running M4
    • Complete transceiver diagnostic data extraction for O&M reporting
    • Disable interrogation data sync from PTAGIS3
    • Consolidate PTAGIS4 data model
    • Complete remaining O&M reports and tools:
      • Diversion Gate Efficiency (DGE) for SbyC operations
      • TASS enunciator tool
ptagis4 field interrogation data processing for 2013 evaluation
PTAGIS4 Field Interrogation Data Processing for 2013 Evaluation

PTAGIS Maintained Sites

M4

(PRIMARY)

MultiMon

(Backup)

MiniMon

(Backup)

  • PTAGIS4
  • Server
  • PTAGIS3
  • Server

PTAGIS3 QueryBuilder

PTAGIS4 Advanced Reports

ptagis4 field interrogation data processing for 2013 evaluation1
PTAGIS4 Field Interrogation Data Processing for 2013 Evaluation

PTAGIS Maintained Sites

Other Interrogation Sites

M4

(PRIMARY)

MultiMon

(Backup)

MiniMon

(Backup)

MiniMon

PIFF

(data logger)

  • PTAGIS4
  • Server
  • PTAGIS3
  • Server

PTAGIS3 QueryBuilder

PTAGIS4 Advanced Reports

ptagis4 field interrogation data processing for 2013 evaluation2
PTAGIS4 Field Interrogation Data Processing for 2013 Evaluation

PTAGIS Maintained Sites

Other Interrogation Sites

M4

(PRIMARY)

MultiMon

(Backup)

MiniMon

(Backup)

MiniMon

PIFF

(data logger)

  • PTAGIS4
  • Server
  • PTAGIS3
  • Server

Patch Manager

PTAGIS3 QueryBuilder

PTAGIS4 Advanced Reports

patch manager utility
Patch Manager Utility
  • Patch gaps in data between systems
  • Source can be M4 or MiniMon
  • Update PTAGIS3 or PTAGIS4 systems
tag code validation on ptagis4 server
Tag Code Validation on PTAGIS4 Server

Each tag code processed as an observation is validated against a list of known tag masks, for example:

3D9.1BF1, 3D9.1C2C, …

If tag code doesn’t match:

  • Observation event marked ‘INVALID’
  • Observation is Processed into reporting datamart
  • Steward is notified

Causes of an ‘INVALID’ tag may be:

  • Spurious Read
  • Unapproved Vendor

‘INVALID’ tag events do not appear in reports by default

Need to create approval process for new vendors and tag types

Tag Validation for Mark, Recapture, Mort Data to be added later

2013 roadmap new system evaluation
2013 Roadmap: New System Evaluation
  • Evaluation tasks during the 2013 out-migration season:
  • Monitor M4 systems – update as needed
  • Continue manual and automated data audits to evaluate PTAGIS4 transition
  • Monitor field data processing in PTAGIS4 – update as needed
  • Maintain both platforms for SbyC operations (M4 and MultiMon)
  • Evaluate new O&M reports and tools – update as needed
2013 roadmap promote ptagis4 website into production
2013 Roadmap: Promote PTAGIS4 Website into Production
  • Promote Beta Website as Production End of March 2013
  • Notify users of this change via email in February
  • May be able to demote current site as legacy
  • www.ptoccentral.org to remain operational for O&M report evaluation
  • ftp.ptagis.org will transition later (TBD)
    • To avoid changing field data collection systems
    • New FTP server is ptagisftp.ptagis.org
2013 roadmap mark data processed via sync into ptagis4
2013 Roadmap: Mark Data Processed via Sync into PTAGIS4

P3

  • PTAGIS4
  • Server
  • PTAGIS3
  • Server

Sync

PTAGIS3 QueryBuilder

PTAGIS4 Advanced Reports

2013 roadmap process mark data directly into ptagis4
2013 Roadmap: Process Mark Data Directly into PTAGIS4
  • Scheduled in Summer 2013
  • Use New Tag Coordinator Features in PTAGIS4
  • Complete decoupling from PTAGIS3
  • Extend Tag Code Validation

P3

  • PTAGIS4
  • Server
  • PTAGIS3
  • Server

Sync

PTAGIS3 QueryBuilder

PTAGIS4 Advanced Reports

2013 roadmap potential deliverables
2013 Roadmap: Potential Deliverables
  • These features and tasks may be accomplished in 2013 as time and resource allow:
  • Develop a replacement Tag Distribution System
    • Based upon Scoping Process
  • Additional Web Content:
    • Existing Interrogation Site Metadata
    • Complete Image Library
    • Add Tagging/Interrogation Videos Resources
  • Additional web-enabled workflow services:
    • New interrogation site requests
    • Additional metadata
2013 roadmap potential deliverables continued
2013 Roadmap: Potential Deliverables Continued
  • These features and tasks may be accomplished in 2013 as time and resource allow:
  • Metadata Analysis and Refinement
    • Refine Data Dictionary
    • Revise Spec-Doc
    • Scope next tagging software P4
    • Enhance M4 interrogation data
  • Interrogation Site Steward Web Portal
    • Stewards to manage interrogation data and metadata
    • Web-enabled PIFF for non-standard data submissions
  • Consolidate raw data file repository
2013 roadmap conditions for delivery
2013 Roadmap: Conditions for Delivery
  • No Contingency Planning
    • Systems Failures
    • Budget Shortfalls
  • Limit Ad-Hoc Requests
    • Includes Technical Coordination and Review
  • Use Remaining Resources Wisely
    • Synergetics Subcontract for PTAGIS3 (Doug Clough) Limited to ~300 hours
    • Limited Subcontracts for PTAGIS4 Development
    • Limited Travel and Training
  • Retain Talent and Morale
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