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David S. Tuch

NAMIC All-Hands Meeting MGH Diffusion Tools Overview. David S. Tuch. Athinoula A. Martinos Center for Biomedical Imaging Massachusetts General Hospital Harvard Medical School. MGH Diffusion. Mission. Clinical Neuroscience. Basic Neuroscience. MR Development. MGH Diffusion. Tools.

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David S. Tuch

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  1. NAMIC All-Hands Meeting MGH Diffusion Tools Overview David S. Tuch Athinoula A. Martinos Center for Biomedical Imaging Massachusetts General Hospital Harvard Medical School

  2. MGH Diffusion Mission Clinical Neuroscience Basic Neuroscience MR Development

  3. MGH Diffusion Tools Diffusion Toolkit Main workflow: Statistical group comparison Interface to best component by domain Matlab, FSL, SPM, MINC, (ITK in progress) Example: Statistical group comparison workflow Motion correction FSLReconstruct tensor data Matlab Normalize to MNI space FSL, MINC Compute group comparison statistics Matlab, R Compute multiple comparisons correction SPM Visualize results VTK

  4. MGH Diffusion Tools Diffusion Visualizer 3D interactive visualization of DTI, fMRI, QBALL VTK, C++, QT CVS, CMake

  5. Neurobiol Aging (in press)

  6. What we could use Tools for Open Source project management Requirements elicitation/gathering Feature request prioritization Support case management Stakeholder resolution Governance

  7. What we can contribute Code QBALL rendering vtkODFGlyphClass Spectral segmentation for DTI MR methods QBALL imaging Multi-modal imaging

  8. Thanks!

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