'Spatial normalisation' presentation slideshows

Image Registration John Ashburner

Image Registration John Ashburner. Pre-processing Overview. Statistics or whatever. fMRI time-series. Template. Anatomical MRI. Smoothed. Estimate Spatial Norm. Motion Correct. Smooth. Coregister. Spatially normalised. Deformation. Contents. Preliminaries Smooth

655 views • 65 slides

Voxel-Based Morphometry with Unified Segmentation

Voxel-Based Morphometry with Unified Segmentation. Ged Ridgway Centre for Medical Image Computing University College London. Thanks to: John Ashburner and the FIL Methods Group. Preprocessing in SPM. Realignment With non-linear unwarping for EPI fMRI Slice-time correction Coregistration

660 views • 64 slides

Spatial Preprocessing

695 views • 59 slides

Image Registration John Ashburner

Image Registration John Ashburner. Smooth Realign Normalise Segment. With slides by Chloe Hutton and Jesper Andersson. Overview of SPM Analysis. Statistical Parametric Map. Design matrix. fMRI time-series. Motion Correction. Smoothing. General Linear Model. Parameter Estimates.

567 views • 55 slides

FIL SPM Course May 2011 Spatial preprocessing

FIL SPM Course May 2011 Spatial preprocessing. Ged Ridgway With thanks to John Ashburner a nd the FIL Methods Group. fMRI time-series m ovie. Preprocessing overview. REALIGN. COREG. SEGMENT. NORM WRITE. SMOOTH. ANALYSIS. Preprocessing overview. Input. fMRI time-series.

533 views • 53 slides

Spatial preprocessing of fMRI data

Spatial preprocessing of fMRI data. Klaas Enno Stephan Laboratory for Social and Neural Systrems Research Institute for Empirical Research in Economics University of Zurich Functional Imaging Laboratory (FIL) Wellcome Trust Centre for Neuroimaging University College London.

554 views • 41 slides

Computational Neuroanatomy John Ashburner john@fil.ion.ucl.ac.uk

Computational Neuroanatomy John Ashburner john@fil.ion.ucl.ac.uk. Smoothing Rigid registration Spatial normalisation Segmentation Morphometry. Overview of SPM Analysis. Statistical Parametric Map. Design matrix. fMRI time-series. Motion Correction. Smoothing. General Linear Model.

409 views • 40 slides

Spatial Preprocessing John Ashburner john@fil.ion.ucl.ac.uk

Spatial Preprocessing John Ashburner john@fil.ion.ucl.ac.uk. Smoothing Rigid registration Spatial normalisation. With slides by Chloe Hutton and Jesper Andersson. Overview of SPM Analysis. Statistical Parametric Map. Design matrix. fMRI time-series. Motion Correction. Smoothing.

374 views • 36 slides

Spatial Preprocessing

Spatial Preprocessing. Ged Ridgway, London With thanks to John Ashburner a nd the FIL Methods Group. Preprocessing overview. Input. fMRI time-series. Anatomical MRI. TPMs. Output. Segmentation. Transformation (seg_sn.mat). Kernel. REALIGN. COREG. SEGMENT. NORM WRITE. SMOOTH.

478 views • 35 slides

Spatial Preprocessing

Spatial Preprocessing. Ged Ridgway, London With thanks to John Ashburner a nd the FIL Methods Group. Preprocessing overview. Input. fMRI time-series. Anatomical MRI. TPMs. Output. Segmentation. Transformation (seg_sn.mat). Kernel. REALIGN. COREG. SEGMENT. NORM WRITE. SMOOTH.

356 views • 35 slides

Zurich SPM Course 2012 Spatial Preprocessing

Zurich SPM Course 2012 Spatial Preprocessing. Ged Ridgway, London With thanks to John Ashburner a nd the FIL Methods Group. fMRI time-series m ovie. Preprocessing overview. REALIGN. COREG. SEGMENT. NORM WRITE. SMOOTH. ANALYSIS. Preprocessing overview. Input. fMRI time-series.

483 views • 33 slides

fMRI Preprocessing John Ashburner

fMRI Preprocessing John Ashburner. Contents. Preliminaries Rigid-Body and Affine Transformations Optimisation and Objective Functions Transformations and Interpolation Within Subject: Realignment & Coregistration Between Subject: Spatial Normalisation & Smoothing.

462 views • 32 slides

Computational Neuroanatomy John Ashburner john@fil.ion.ucl.ac.uk

Computational Neuroanatomy John Ashburner john@fil.ion.ucl.ac.uk. Smoothing Motion Correction Between Modality Co-registration Spatial Normalisation Segmentation Morphometry. Overview. Statistical Parametric Map. Design matrix. fMRI time-series. kernel. Motion correction. smoothing.

282 views • 28 slides

Statistical Parametric Mapping for fMRI, PET and VBM

Statistical Parametric Mapping for fMRI, PET and VBM. Ged Ridgway Wellcome Trust Centre for Neuroimaging UCL Institute of Neurology. SPM Course October 2011. Contents. Historical background Positron emission tomography (PET) Statistical parametric mapping (SPM)

492 views • 26 slides

Co-registration and Spatial Normalisation

Co-registration and Spatial Normalisation. Martin Chadwick and Catherine Sebastian. Statistical Parametric Map. Design matrix. fMRI time-series. kernel. Motion correction. Smoothing. General Linear Model. (Co-registration and) Spatial normalisation. Parameter Estimates. Standard

381 views • 26 slides

Statistical Parametric Mapping for fMRI, PET and VBM

Statistical Parametric Mapping for fMRI, PET and VBM. Ged Ridgway Wellcome Trust Centre for Neuroimaging UCL Institute of Neurology. SPM Course October 2011. Contents. Historical background Positron emission tomography (PET) Statistical parametric mapping (SPM)

264 views • 26 slides

EBC-DARPA project: Contribution of Maastricht group

EBC-DARPA project: Contribution of Maastricht group. Elia Formisano, Federico de Martino, Giancarlo Valente, Rainer Goebel. Analysis of movie data. Standard analysis steps (BrainVoyager QX) Data-driven group ICA to define common patterns Training and optimization of SVM-based classifiers.

192 views • 7 slides