'Query sequences' presentation slideshows

Multiple Sequence Alignment (II)

C. E. N. T. E. R. F. O. R. I. N. T. E. G. R. A. T. I. V. E. B. I. O. I. N. F. O. R. M. A. T. I. C. S. V. U. Introduction to bioinformatics 2008 Lecture 8. Multiple Sequence Alignment (II). Progressive multiple alignment. 1. Score 1-2. 2. 1. Score 1-3. 3.

1.02k views • 80 slides

SEPP and TIPP for metagenomic analysis

SEPP and TIPP for metagenomic analysis. Tandy Warnow Department of Computer Science University of Texas. Metagenomics: Venter et al., Exploring the Sargasso Sea: Scientists Discover One Million New Genes in Ocean Microbes. Computational Phylogenetics and Metagenomics.

708 views • 61 slides

Lecture 11:

727 views • 61 slides

Estimating Ultra-large Phylogenies and Alignments

Estimating Ultra-large Phylogenies and Alignments. Tandy Warnow Department of Computer Science The University of Texas at Austin. How did life evolve on earth?. Courtesy of the Tree of Life project. NP-hard optimization problems Stochastic models of evolution Statistical methods

712 views • 60 slides

A Bayesian method for DNA barcoding

A Bayesian method for DNA barcoding. Kasper Munch, Wouter Boomsma, Eske Willerslev, Rasmus Nielsen, University of Copenhagen. Assignment to existing species. Identification of new species. Assignment to taxonomic levels in general. Varieties of barcoding. Motivation.

373 views • 22 slides

Author : Yongchao Liu, Douglas L Maskell, Bertil Schmidt Publisher: BMC Research Notes, 2009

CUDASW++: optimizing Smith-Waterman sequence database searches for CUDA-enabled graphics processing units. Author : Yongchao Liu, Douglas L Maskell, Bertil Schmidt Publisher: BMC Research Notes, 2009 Speaker : De Yu Chen Data: 2011/4/20. Outline. Introduction Smith-Waterman Algorithm

300 views • 21 slides