'Protein identification' presentation slideshows

Proteomics & Mass Spectrometry

Proteomics & Mass Spectrometry. Nathan Edwards Center for Bioinformatics and Computational Biology. Outline. Proteomics Mass Spectrometry Protein Identification Peptide Mass Fingerprint Tandem Mass Spectrometry. Proteomics. Proteins are the machines that drive much of biology

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Mass Spectrometry 101 An Introductory Lecture On Mass Spectrometry Fundamentals

1.58k views • 58 slides

Introduction to biotechnology

Introduction to biotechnology. Haixu Tang School of Informatics. Biotechnology. Cell technology Isolating cells Growing cells in culture Fractionating cells Molecular technology DNA cloning DNA sequencing Gene expression Analyzing protein functions. Isolating Cells.

921 views • 51 slides

Proteomics Informatics David Feny?

Proteomics Informatics David Feny?. Course Information. http://fenyolab.org/pi2018. Protein Identification and Quantitation. Samples. Peptides. Mass Spectrometry. Quantity. intensity. m/z. Identity. Central Dogma of Molecular Biology. Transcription. Replication. Translation.

744 views • 50 slides

Computational Proteomics

Computational Proteomics. Dong Xu Computer Science Department 109 Engineering Building West E-mail: xudong@missouri.edu http://digbio.missouri.edu 573-882-7064 (O). Outline. Introduction Protein identification using Mass-spec Protein interaction and pathway Summary.

626 views • 47 slides

Weekly Report Start learning GPU

Weekly Report Start learning GPU. Ph.D. Student: Leo Lee Supervisor: Dr. Xiaowen Chu Date: Sep. 11, 2009. Outline. Protein identification and pFind GPU and data mining Research Plan. Protein identification and pFind. Background Identify flow Challenges

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PRINCIPLE AND INSTRUMENTATION OF CAPILLARY ELECTROPHORESIS

PRINCIPLE AND INSTRUMENTATION OF CAPILLARY ELECTROPHORESIS. Muhammad Shoaib Khan GM Centre - 1. CONTENTS. Introduction Electrophoresis Overview Importance Of separation technique Why capillary Electrophoresis What is CE Types of CE CE The Basics of the instrumentation

1.13k views • 35 slides

Top-down characterization of proteins in bacteria with unsequenced genomes

Top-down characterization of proteins in bacteria with unsequenced genomes. Nathan Edwards Georgetown University Medical Center. Microorganism Identification. Homeland-security/defense applications Long history of fingerprinting approaches Clinical applications in strain identification:

383 views • 29 slides

Peptide Sequencing by Mass Spectrometry

Peptide Sequencing by Mass Spectrometry. Alex Ramos 5 April 2005. Edman degradation. Edman Degradation v. MS/MS. Why study proteins?. machines that make cells function RNA levels do not always accurately predict protein levels targets of drugs. Edman Degradation MS More sensitive

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Finding Biomarkers for Transplantation

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Top-down characterization of proteins in bacteria with unsequenced genomes

Top-down characterization of proteins in bacteria with unsequenced genomes. Colin Wynne Catherine Fenselau University of Maryland, College Park Nathan Edwards Georgetown University Medical Center. Microorganism Identification. Important application of mass spectrometry

289 views • 19 slides

Glucose

Chaperone protein dnaK (HSP 70) Mycobacterium paratuberculosis matched 7/ A.A. cover 22%. HSP 65 Mycobacterium sp. graecum DL049 matched 6 / A.A. cover 19%. MNO Mycobacterium sp. strain JC1 matched 13 / A.A. cover 41%. probable atpD protein Mycobacterium tuberculosis

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OpenDMAP :

OpenDMAP :. An open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expressions by Hunter, et al. OpenDMAP. Ontology-driven: An ontology is the backbone of the system.

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Each results report will contain: C hromatogram for sample

Each results report will contain: C hromatogram for sample All proteins identified with probability <1.0 List of peptides identified for each protein Amino acid coverage of each protein identified. Example of a chromatogram (peptide with 12.6 min retention time highlighted in red ).

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Yin-Yang Column for Global Protein Identification

Yin-Yang Column for Global Protein Identification. Column Technology Inc. The Yin-Yang column combines anion and cation exchange chromatography For the protein identification through multi-LC/MS/MS:. Yin-Yang MDLC-MS/MS. Advantages of Yin-yang MDLC-MS/MS. Three-dimensional LC-MS/MS

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Mass spectrometry and mummies

Mass spectrometry and mummies. Professor Paul A. Haynes. Biomolecular Frontiers Research Centre Department of Chemistry and Biomolecular Sciences Macquarie University, North Ryde, Sydney, Australia. Mass Spectrometry.

221 views • 5 slides

Tryptic digestion

Centre for Protein Research, Department of Biochemistry, University of Otago Torsten Kleffmann (Research Fellow) , Joanne Preston (Technician) , Diana Carne (Technician). Proteomics Workflow for Gel-based and LC-coupled Mass Spectrometry.

160 views • 1 slides