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Mining Motifs from Biosequences

Mining Motifs from Biosequences

Mining Motifs from Biosequences. Computer Science Department National Chiao Tung University Yuh-Jyh Hu. Outline. Introduction to DNA Sequence Motif Prediction Characteristics of DNA Motif-finding Problem Issues of DNA Motif-finding Algorithms Examples and current research directions

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716 views • 51 slides
Bioinformatics Tools for Genotyping

Bioinformatics Tools for Genotyping

Bioinformatics Tools for Genotyping. Frances Tong Dr. Garry Larson, Ph.D City of Hope Department of Molecular Medicine Southern California Bioinformatics Institute Summer 2003 Funded by the National Science Foundation and the National Institutes of Health. Overview of Summer Program.

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686 views • 42 slides
Distance Methods

Distance Methods

Distance Methods. Distance Methods. Distance Estimates attempt to estimate the mean number of changes per site since 2 species (sequences) split from each other

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511 views • 38 slides
Distance Methods

Distance Methods

Distance Methods. Distance Methods. Distance Estimates attempt to estimate the mean number of changes per site since 2 species (sequences) split from each other

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532 views • 38 slides
Distance Methods

Distance Methods

Distance Methods. Distance Methods. Distance Estimates attempt to estimate the mean number of changes per site since 2 species (sequences) split from each other

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399 views • 38 slides
Tree building

Tree building

Tree building. The number of strictly bifurcating, unrooted trees for T taxa (=leaves, =terminal branches) is given by:. Note that the number of trees increases with T at much greater than exponential rate (actually related to the factorial). Tree building strategy. T3. T3. T3. T2. T2.

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425 views • 30 slides

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