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INFOBIOMED meeting

INFOBIOMED meeting. Barcelona, 16 – 17 November, 2004. Fernando Martin-Sanchez. Looking back…. WP2: Dissemination and Communication. 2.1 Answering the survey on collaboration tools 2.1: Development of the internal dissemination tool (ISCIII) 2.2: Updates: Website

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INFOBIOMED meeting

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  1. INFOBIOMED meeting Barcelona, 16 – 17 November, 2004 Fernando Martin-Sanchez Barcelona, 16 – 17 November, 2004

  2. Looking back… Barcelona, 16 – 17 November, 2004

  3. WP2: Dissemination and Communication • 2.1 Answering the survey on collaboration tools • 2.1: Development of the internal dissemination tool (ISCIII) • 2.2: Updates: • Website • Functional definition of the new Gateway (next page) • DB dissemination activities • Newsletter. • Deliverable D5: action plan Barcelona, 16 – 17 November, 2004

  4. WP 2. Gateway database Entities • Events and announcements • Future • Past • Repository Entities Topics • Links Barcelona, 16 – 17 November, 2004

  5. Gateway Barcelona, 16 – 17 November, 2004

  6. Barcelona, 16 – 17 November, 2004

  7. Barcelona, 16 – 17 November, 2004

  8. Barcelona, 16 – 17 November, 2004

  9. Barcelona, 16 – 17 November, 2004

  10. Barcelona, 16 – 17 November, 2004

  11. Barcelona, 16 – 17 November, 2004

  12. Barcelona, 16 – 17 November, 2004

  13. Barcelona, 16 – 17 November, 2004

  14. WP3 • Submission of surveys before deadline • Contribution to Training database Thesaurus Barcelona, 16 – 17 November, 2004

  15. WP 3 – Training database Thesaurus • Areas of interest Barcelona, 16 – 17 November, 2004

  16. WP 3 – Training database Thesaurus • Areas of interest Barcelona, 16 – 17 November, 2004

  17. WP 3 – Training database Thesaurus • Biomedical technologies • Technologies in support of clinical diagnosis (RT-PCR, Mass Spectrometry) • Biosensors, biochips and labchips (microarray, protein chip, DNA array, genechip) • Nanotechnology (nanochip) • Biomedical Informatics • Disease oriented informatics (cancer-informatics, neuro-informatics, cardio-informatics) • e-learning and CME for genomic medicine • Molecular and functional imaging • Modelling and simulation (e-cell, e-disease, e-body) • Genomic epidemiology: biobanks • Pharmacogenetic knowledge and data bases • Integration of biomedical vocabularies and terminologies • Integration of genetic data in medical standards (Genetic EHR) • Text mining in biomedical literature • Clinical and genetic databases integration • Phenome project (phenomics) • Tumour databases (tumour bank) • Disease-gene association studies • Clinical genomics (Clinical validation of genomic research) • Biomedicine • Genomic medicine (molecular medicine, personalized medicine, individualized medicine) • Pharmacogenomics and Pharmacogenetics • Epidemiology and public health • Genomic epidemiology (genetic epidemiology) • Cancer • Microbial genomics • Cardiovascular diseases • Neurodegenerative diseases • Rare diseases (orphan drugs) • Dental diseases • Medical genetics (clinical genetics, genetic tests, genetic diagnosis) • Ethical, Legal and Social issues (ELSI) • Security (confidenciality, data protection) • Quality (Quality assurance, accreditation, software testing) • Information and Communication Technologies (ICT) • Data mining and data visualization (clustering, SVM, PCA, SOM) • Information retrieval and digital libraries • Biostatistics • Standards in data interchange (XML) • Biocomputing (neural nets, genetic algorithms, evolutive programming) • Interfaces and usability (operating system) • Knowledge management (Ontologies) • Communication networks. GRID. Internet 2 • Databases (DBMS, SQL, EAV) • Semantic web (web services, UDDI, SOAP) • Hardware and software (requirements, architecture) • Bioinformatics • Phylogeny and evolution • Search, prediction and identification of genes (gene finding) • Tools to support sequencing and mapping • Protein bioinformatics • LIMS and integrated search engines • Individual genomics (SNPs, Haplotypes, mutations, genetic variation, STRs) • Functional genomics (gene expression, SAGE) • Comparative genomics (Homology, synteny) • Proteomics (2D-ef, MS, gel images) • Structural bioinformatics (Docking, ligand, target, interaction) • Sequence alignment and comparison • Systems biology (computational biology, metabolic network, genetic network) • Standards (MIAME, MAGE-ML, GO) • Medical Informatics • Health information systems • Primary care Informatics • Nursing informatics • Decision making support and evidence-based medicine (clinical guidelines) • Medical image processing (DICOM, CAT, SPECT, NMR, ) • Electronic health records (Computerized patient records, electronic clinical record) • Clinical trials • Outcomes research and technology assessment • Informatics in public health and epidemiology (bioterrorism) • Telemedicine (Telesurgery, teleconsultation) • Healthcare management information systems (Hospital Information Systems) • Standards (HL7, LOINC, SNOMED, ICD, CPT) Barcelona, 16 – 17 November, 2004

  18. WP4 • Elaboration of the deliverable 4.1, coordinated by UPM. • Integration of the contribution of AJ Brookes. Barcelona, 16 – 17 November, 2004

  19. WP6 • Meeting with ACTA 11/October, Amsterdam Barcelona, 16 – 17 November, 2004

  20. Marimon Report • Assesment of new instruments • Panel led by Ramon Marimon (former Secretary of Science and Tech. in Spain) • Recommendations • Continue in FP7. Appropiate toward ERA goals. Implementation need improvement. OK • Providing criteria to differentiate between NoE and Ips. OK • EC should define instruments. Researchs topics. NO • Not large, big scope. IN PROGRESS • Concept of durable integration. IN PROGRESS • More money to STREPS. IN PROGRESS • Attract more emergent groups anmd SMEs. IN PROGRESS • Collaboration with other funding entities. IN PROGRESS • Two steps evaluation process. FREE FOR EVERY PROGRAM • Simplify financial rules. IN PROGRESS Barcelona, 16 – 17 November, 2004

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