1 / 9

Lab Meeting Presentation

Lab Meeting Presentation. Evan Keibler 8-27-03. Coalescence Points. Procedure. Original plan: Keep track of number of live nodes Search when number of live nodes falls below some threshold Current method: Search when 50,000 bases from last cpoint.

leanne
Download Presentation

Lab Meeting Presentation

An Image/Link below is provided (as is) to download presentation Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author. Content is provided to you AS IS for your information and personal use only. Download presentation by click this link. While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server. During download, if you can't get a presentation, the file might be deleted by the publisher.

E N D

Presentation Transcript

  1. Lab Meeting Presentation Evan Keibler 8-27-03

  2. Coalescence Points

  3. Procedure • Original plan: • Keep track of number of live nodes • Search when number of live nodes falls below some threshold • Current method: • Search when 50,000 bases from last cpoint. • If not found wait 5,000 then search again

  4. Cpoint Separation • Average over 44 500kb sequences • Number of Segments: 6.27 • Average Distance between cpoints: 63000 • Standard deviation of cpoint distances: 98000 • Last cpoint: 309000 • 8 sequences with no cpoint (18%)

  5. Cpiont Location Data

  6. Cpoint Separation Data

  7. Cpoint separation • Average over 242 1MB sequences • Number of Segments: 13.77 • Average Distance between cpoints: 62000 • Standard deviation of cpoint distances: 127000 • Last cpoint: 709000 • 35 sequences with no cpoint (14%)

  8. 1MB Sequence Cpoint Locations

  9. 1MB Sequence Cpoint Separation Distribution

More Related