Dot Plots. DNA dot plots. Identification of regions of Similarity between two sequences Insertions-deletions: Introns Repetitive regions (self-self analysis) Inverted repeats. Repeats. All DNA sequences contain repeats. Repeats. All DNA sequences contain repeats. Window size.
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Identification of regions of
Introns are spliced out in the mRNA
Analysis of a random sequence of Homo sapiens chromosome 7 reveals numerous short inverted repeats
A self-self plot reveals some repetitive regions.
A plot of the Alu sequence against its reverse-complement reveals its inverted repeat (palindromic) nature, seen as the diagonal along the entire sequence length