Suppl. Fig . 1

1. Fig. 7. Genome maps of unusual or novel circular DNAs. (a) Begomoviral full-length DNA-A showing the positions of the predicted genes (shown by arrows) encoded in both virion and complementary sense. Externally, the positions on the complete genome of the defective molecules are shown by full lines, and the segments in recombinants by dashed lines. (b) Begomoviral full-length alphasatellite DNA showing the positions of the alphaRep gene and the A-rich region. Externally, the positions on the complete genome of the defective molecules are shown by full lines, and the segments in recombinants by dashed lines. (c) Begomoviral full-length betasatellite showing the positions of the betaC1 gene and the A-rich region. Externally the position on the complete molecule of the segment present in recombinant L2-RCA-A3-r is shown. (d) Molecule LG-RCA-b1-r, a recombinant betasatellite molecule. The sequence in light gray is an inverted repeat. The upper inverted betaC1 ORF is truncated. (e) Molecule L2-RCA-A3-r, a recombinant between the DNA-A molecule L2-RCA-A1-F and the betasatellite molecule L2-RCA-b1-F. Four DNA-A ORFs are shown, which terminate inside the betasatellite-derived sequence. The positions on the DNA-A and on the betasatellite of the parental sequences are shown in figure 7a and7b. (f) Molecule 9S1-RCA-a6-r, a recombinant between the alphasatellite molecule 9S1-RCA-a3-F and a CLCuV DNA-A molecule (whose sequence is inverted). The two origins of replication (ori) are shown, along with the ORFs, whose partial sequence is identical to the alphaRep and the AV1 genes. The positions on the DNA-A and on the alphasatellite DNA of the parental sequences are shown in figure 7a and 7c. Maps not shown to scale.   Please move to SOM Suppl. Fig. 1 a) DNA-A b) alphasatellite c) betasatellite d) LG-RCA-b1-r e) L2-RCA-A3-r f) 9S1-RCA-a6-r Suppl Fig. 1Genome maps of unusual or novel circular DNAs. (a) Begomoviral full-length DNA-A showing the positions of the predicted genes (shown by arrows) encoded in both virion and complementary sense. Externally, the positions on the complete genome of the defective molecules are shown by full lines, and the segments in recombinants by dashed lines. (b) Begomoviral full-length alphasatellite DNA showing the positions of the alphaRep gene and the A-rich region. Externally, the positions on the complete genome of the defective molecules are shown by full lines, and the segments in recombinants by dashed lines. (c) Begomoviral full-length betasatellite showing the positions of the betaC1 gene and the A-rich region. Externally the position on the complete molecule of the segment present in recombinant L2-RCA-A3-r is shown. (d) Molecule LG-RCA-b1-r, a recombinant betasatellite molecule. The sequence in light gray is an inverted repeat. The upper inverted betaC1 ORF is truncated. (e) Molecule L2-RCA-A3-r, a recombinant between the DNA-A molecule L2-RCA-A1-F and the betasatellite molecule L2-RCA-b1-F. Four DNA-A ORFs are shown, which terminate inside the betasatellite-derived sequence. The positions on the DNA-A and on the betasatellite of the parental sequences are shown in figure 7a and7b. (f) Molecule 9S1-RCA-a6-r, a recombinant between the alphasatellite molecule 9S1-RCA-a3-F and a CLCuV DNA-A molecule (whose sequence is inverted). The two origins of replication (ori) are shown, along with the ORFs, whose partial sequence is identical to the alphaRep and the AV1 genes. The positions on the DNA-A and on the alphasatellite DNA of the parental sequences are shown in figure 7a and 7c. Maps not shown to scale.   Please move to SOM