What does the future hold
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What does the future hold?. SAPHIRE CCP4 libraries Program Developments More automation 3D viewer Project CCP4 Study Weekend 2003 BAR!. SAPHIRE.

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What does the future hold?

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What does the future hold

What does the future hold?

SAPHIRE

CCP4 libraries

Program Developments

More automation

3D viewer Project

CCP4 Study Weekend 2003

BAR!


Saphire

SAPHIRE

  • Reads protein sequences in SwissProt format either stored locally or when downloaded from a specified database. This sequence can then be edited for future use.

  • Will be expanded further to include sequence alignment functions for model building.

  • Author: Pryank Patel, CCP4


Ccp4 libraries

CCP4 Libraries

  • Full functionality of CCP4 Libraries in C and C++

  • Legacy applications will still work!

  • Library calls can be used directly from scripts.

  • Faster development of software.

  • Many existing applications being translated into C and C++


Program developments phaser

Program developments: PHASER

Independent development of Randy Read and co-workers.

Maximum likelihood methods for SIR/MIR, SAD/MAD and MR accounting for pairwise correlations between datasets.

Fully integrated program for experimental phasing and molecular replacement, including heavy atom location.

To be included in CCP4, and ccp4i interface being developed.

phaser


More automation

More Automation


3d viewer project

3D Viewer Project


Autostruct

AUTOSTRUCT

The core of this project is to bring together the efforts of most of the major European software developers for X-ray crystallography towards achieving the goal of making the procedure of structure solution more effective, in terms of using more powerful algorithms to solve, refine and validate structures. The software should not only be as transparent as possible to the end user, but also assist in the case of user inexperience.

www.autostruct.org


Ccp4 study weekend 2003

CCP4 Study Weekend 2003

Venue: University of York

Date:3/4 January 2003

Subject:Experimental Phasing

Scientific Organisers:

Neil McDonald (Birbeck College, London)

Airlie McCoy (University of Cambridge)


Questionnaire

Questionnaire

Please fill in your Questionnaire and return it to

one of the speakers or to the CCP4 stand.

Help us to help you!


Acknowledgements

Acknowledgements

  • York University

    • Kevin Cowtan - clipper, csym

    • Liz Potterton - MG, ccp4i

    • Garib Murshudov - refmac

    • Yao Jia-Xing – acorn

    • Alexei Vagin - molrep

    • Eleanor Dodson

  • Cambridge University

    • Randy Read, Airlie McCoy

  • Funding

    • BBSRC – CCP4

    • EU - AUTOSTRUCT

  • and many more ...

  • Daresbury Laboratory

    • Martyn Winn - cmtz, csym

    • Alun Ashton - XML

    • Peter Briggs - ccp4i

    • Charles Ballard - cmap

  • European Bioinformatics Institute

    • Kim Henrick- data harvesting

    • Eugene Krissinel - mmdb

  • MRC-LMB, Cambridge

    • Andrew Leslie, Harry Powell, Graeme Winter - mosflm

    • Phil Evans


Thanks today

Thanks Today:

Harry Powell

Roberto Steiner

Bernhard Rupp

Steve Prince

Maeri Howard-Eales


The end

The End!

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