Functional Genomics. Functional genomic datasets Biological networks Integrating genomic datasets. BIO520 Bioinformatics Jim Lund. Functional genomics. Genome scale experiments to understand the function of all the proteins--what they do and how they interact.
Download Policy: Content on the Website is provided to you AS IS for your information and personal use and may not be sold / licensed / shared on other websites without getting consent from its author.While downloading, if for some reason you are not able to download a presentation, the publisher may have deleted the file from their server.
Functional genomic datasets
Integrating genomic datasets
BIO520 Bioinformatics Jim Lund
Single gene expression database for the mouse research community. Integrated in the Mouse Genome Database (MGD) at the Jackson Laboratory.
10,302 expression entries
WT1 expression (red) on a section of the E9 (Theiler Stage 14) embryo from the Edinburgh Mouse Atlas. The gut epithelium is shown in yellow and the neural tube in a blue overlay. WT1 is expressed in the presumptive mesothelium of the coelom and in the intermediate mesoderm (ventral to the somites).
Pentose phosphate cycle
5P Ribosyl-5-amino 4-
The list of genes being activated or inactivated or that are unaffected when comparing two samples becomes more informative if the genes can be mapped onto maps from which functions can be deduced.