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Information Management and Distributed Data. Reagan W. Moore Wayne Schroeder Mike Wan Arcot Rajasekar Richard Marciano {moore, schroede, mwan, sekar, marciano}@sdsc.edu http://www.sdsc.edu/srb http://irods.sdsc.edu/. Data Grid Software. Storage Resource Broker http://www.sdsc.edu/srb

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Information management and distributed data

Information Management and Distributed Data

Reagan W. Moore

Wayne Schroeder

Mike Wan

Arcot Rajasekar

Richard Marciano

{moore, schroede, mwan, sekar, marciano}@sdsc.edu

http://www.sdsc.edu/srb

http://irods.sdsc.edu/


Data grid software
Data Grid Software

  • Storage Resource Broker

    • http://www.sdsc.edu/srb

  • iRODS - integrated Rule-Oriented Data System

    • http://irods.sdsc.edu

    • Version 0.9 released May 30, 2007

    • Version 1.0 scheduled for fall, 2007

    • Open source - BSD license


Concepts
Concepts

  • Distributed Data Management Concepts

    • Data virtualization

      • Infrastructure independence

    • Trust virtualization

      • Administrative domain independence

    • Federation

  • Rule-based Data Management

    • Management virtualization

      • Automating execution of management policies

      • Coupling management policies to assertions about data


Data virtualization
Data Virtualization

  • Manage properties of each digital entity independently of the remote storage systems

    • Infrastructure independence

  • Properties

    • Name spaces

    • Persistent state information (location, size,…)

  • Manage standard operations

    • Client actions

    • Operations performed at remote storage systems


Data virtualization1
Data Virtualization

Access Interface

Map from the

actions requested by

the access method

to a standard set of

micro-services used

to interact with the

storage system

Standard Access Actions

Data Grid

Standard Micro-services

Storage Protocol

Storage System


Federation between data grids
Federation Between Data Grids

Data Access Methods (Web Browser, DSpace, OAI-PMH)

Data Collection A

Data Collection B

  • Data Grid

  • Logical resource name space

  • Logical user name space

  • Logical file name space

  • Logical rule name space

  • Logical micro-service name

  • Logical persistent state

  • Data Grid

  • Logical resource name space

  • Logical user name space

  • Logical file name space

  • Logical rule name space

  • Logical micro-service name

  • Logical persistent state


Production data grids observations
Production Data Grids: Observations

  • Data grids manage shared collections that are distributed across multiple storage systems and institutions

    • Data grids are responsible for providing recovery mechanisms for all errors that occur in the distributed environment

    • The number of observed problems is proportional to the size of the collections

  • Need to minimize labor costs by automating:

    • Application of management policies

    • Execution of administrative functions for error recovery

    • Validation of preservation assessment criteria


Observations of production data grids
Observations of Production Data Grids

  • Each community implements different management polices

  • Need a mechanism to support the socialization of shared collections

    • Community specific preservation objectives

    • Community specific assertions about properties of the shared collection

    • Community specific management policies


Irods
iRODS

  • What additional levels of virtualization are required to support advanced data management applications?

  • Observe that each community imposes different management policies.

    • Different criteria for data retention, disposition, access control, data caching, replication

    • Assertions on collection integrity and authenticity such as required metadata

    • Assertions on data distribution, data transport

  • Need the ability to characterize management policies, automate their application, and verify collection properties


Socialization of data collections
Socialization of Data Collections

  • Management policies are a mechanism for the "socialization" of a collection. The management policies describe how the collection can be accessed by a broader community, the internal consistency mechanisms that maintain the reputation of the builders of the collection, and the collection consistency properties that the broader community can expect when they access the data.

  • Management policies transform from the expectations of the designated community that built the collection to the expectations of the wider world that uses the collection.

  • While management policies are unique for each record collection, generic management policies exist that can be tuned to represent the "socialization" of the collection.


Data management
Data Management

iRODS - integrated Rule-Oriented Data System


Rule based data management
Rule-based Data Management

  • Map from management policies to rules controlling execution of remote micro-services

  • Manage persistent state information for results of each micro-service execution

  • Support an additional three logical name spaces

    • Rules

    • Micro-services

    • Persistent state information


Irods integrated rule oriented data system
iRODS - integrated Rule-Oriented Data System

Client Interface

Admin Interface

Rule Invoker

Resources

Service

Manager

Rule

Modifier

Module

Config

Modifier

Module

Metadata

Modifier

Module

Resource-based

Services

Rule

Consistency

Check

Module

Consistency

Check

Module

Consistency

Check

Module

Engine

Micro

Service

Modules

Current State

Confs

Metadata-based

Services

Rule

Base

Metadata

Persistent

Repository

Micro

Service

Modules


Management virtualization
Management Virtualization

  • Standard policies expressed as rules

  • Rules control execution of data management and access operations

    • Integrity

      • Validation of checksums

      • Synchronization of replicas

      • Data distribution

      • Data retention

      • Access controls

    • Authenticity

      • Chain of custody - audit trails

      • Required preservation metadata - templates

      • Generation of AIPs, DIPS


Example rules
Example Rules

  • Rule composed of four parts:

    • Name | condition | micro-service set | recovery

  • Rule to automate replication of data for a specific collection

    acPostProcForPut |

    $objPath like /tempZone/home/rods/nvo/* | msiSysReplDataObj(nvoReplResc,null) |

    nop

  • Rule types

    • Internal, administrative, user-defined

    • Atomic, deferred, periodic


Three classes of rules
Three Classes of Rules

  • Internal rules

    • Used within iRODS for standard data manipulation services

  • Administrator rules

    • Set by data grid administrator to enforce policies on shared collection

  • User-defined rules

    • Support server-driven workflows


Rule based data management1
Rule-based Data Management

  • Associate rules with combinations of name spaces

    • Rule set for a particular collection

    • Rule set for a particular user group

    • Rule set for a particular user group when accessing a particular collection

    • Rule set for a particular storage system

    • Rule set for a particular micro-service

    • Generic rules based on SRB operations


Administrative rules
Administrative Rules

  • Currently 15 administrative rules

    • Administrative

    • Storage selection

    • Data pre-processing

    • Data post-processing

    • Data deletion

    • Parallel I/O


Administration creation rules
Administration Creation Rules

acCreateUser | | msiCreateUser##

acCreateDefaultCollections##

msiCommit | msiRollback##

msiRollback##nop

acVacuum(*arg1) | | delayExec(msiVacuum,*arg1) | nop

acCreateDefaultCollections | | acCreateUserZoneCollections | nop

acCreateUserZoneCollections | |

acCreateCollByAdmin(/$rodsZoneProxy/home,$otherUserName)##

acCreateCollByAdmin(/$rodsZoneProxy/trash/home,$otherUserName)

| nop##nop

acCreateCollByAdmin(*parColl,*childColl) | |

msiCreateCollByAdmin(*parColl,*childColl) | nop


Administration deletion rules
Administration Deletion Rules

acDeleteUser | | acDeleteDefaultCollections##

msiDeleteUser##

msiCommit | msiRollback##msiRollback##nop

acDeleteDefaultCollections | | acDeleteUserZoneCollections | nop

acDeleteUserZoneCollections | |

acDeleteCollByAdmin(/$rodsZoneProxy/home,$otherUserName)##

acDeleteCollByAdmin(/$rodsZoneProxy/trash/home,$otherUserName)

| nop##nop

acDeleteCollByAdmin(*parColl,*childColl) | |

msiDeleteCollByAdmin(*parColl,*childColl) | nop


Data manipulation rules
Data Manipulation Rules

Rule for pre-processing on storage use

acSetRescSchemeForCreate | |

msiSetDefaultResc(demoResc,noForce)##

msiSetRescSortScheme(random)##

msiSetRescSortScheme(byRescType)

| nop##nop##nop

Rule for pre-processing on data reads

acPreprocForDataObjOpen | | msiSortDataObj(random) | nop

Rule for post processing data writes

acPostProcForPut | | nop | nop

acPostProcForCopy | | nop | nop

Rule for setting number of threads for parallel I/O

acSetNumThreads | | msiSetNumThreads(default,default,default) | nop

Rule for data deletion policy setting

acDataDeletePolicy | | nop | nop


Planned development
Planned Development

  • Implement the rules and micro-services needed for the listed ERA capabilities

    • Have identified 174 micro-services

      • Data manipulation

      • Structured information manipulation

    • Have identified 212 persistent state attributes

  • Implement the rules and micro-services needed to validate assessment criteria for trusted digital repositories

    • Have identified 176 rules


Era capability categories
ERA Capability Categories

  • Accession

  • Arrangement

  • Description

  • Preservation

  • Access

  • Disposition

  • Subscription

  • Notification

  • Task queuing

  • Transformative migration

  • Display transformation

  • Automated client specification

  • System performance and failure reports.


Summary of mapping era capabilities to management rules
Summary of Mapping ERA Capabilities to Management Rules

  • ERA integrates capabilities of multiple systems

    • PAWN submission pipeline - 34 operations

    • Cheshire indexing system - 13 operations

    • Kepler workflow - 53 operations

    • iRODS data management - 597 operations

    • Operations facility - the remaining capabilities

  • The 597 operations are executed by 174 generic rules

  • The analysis identified five types of metadata attributes:

    • Collection metadata - 11 attributes

    • File metadata - 123 attributes

    • User metadata - 38 attributes

    • Resource metadata - 9 attributes

    • Rule metadata - 32 attributes


Example era capabilities
Example ERA Capabilities

  • Structured information

  • DIP format template

  • Disposition agreement format template

  • Disposition action format template

  • Physical location report template

  • Inventory report template

  • Data movement summary report template

  • Access report template

  • File migration report template

  • Document internal access control template

  • AIP format template

  • Transfer format template

  • Access review determination rule template

  • Access review determination report template

  • Validate access classification rule template

  • File transfer discrepancy report template

  • Notification review report template

  • Redaction rule template

  • Search display template

  • File display template (file type)

  • Format conversion format template

  • Workbench display template

  • Request help format template

  • Record manipulation

  • List files

  • Display file (template)

  • Format file

  • Delete file

  • Delete file authorized

  • Delete file copies

  • Delete file versions

  • Erase file

  • Replace file

  • Set file version

  • Create soft link

  • Replicate file

  • Synchronize replicas

  • Physically move file

  • Annotate file

  • Access URL

  • Check vault

  • Monitor space used

  • Output file

  • Register file

  • Regenerate system metadata

  • Set number of items per display page


Theory of data managment
Theory of Data Managment

  • Characterization

    • Persistent name spaces

       Operations that are performed upon the persistent name spaces

       Changes to the persistent state information associated with each persistent name space that occur for each operation

    • Transformations that are made to the records on each operation

  • Completeness

     Set of operations is complete, enabling the decomposition of every data management process onto the operation set.

     Data management policies are complete, enabling the validation of all data assessment criteria.

     Persistent state information is complete, enabling the validation of authenticity and integrity and management policies.

  • Assertion

    • If the operations are reversible, then a future data management environment can recreate a record in its original form, maintain authenticity and integrity, support access, and display the record.

       Such a system would allow records to be migrated between independent implementations of data management environments, while maintaining authenticity and integrity.