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TrackVis Interface

Graphics Objects Property of Rendered Area. Rendering Area. Property of Graphics Object. Image Loading/Preview. TrackVis Interface. Replace Tracks Scene Density Map Screenshot Movie Frames. Menu. Scene. Density Map. Note short keys Control Panel Image Panel Stereo Render

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TrackVis Interface

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  1. Graphics Objects Property of Rendered Area Rendering Area Property of Graphics Object Image Loading/Preview TrackVis Interface

  2. Replace Tracks Scene Density Map Screenshot Movie Frames Menu

  3. Scene

  4. Density Map

  5. Note short keys Control Panel Image Panel Stereo Render Straighten Full Screen Set Background Track Groups Statistics Menu

  6. ROIS Ball Hand-draw Nifti/Analyze Image From scene Networking Settings How to use it Menu

  7. Image Panel Image Loading/Preview

  8. Image Panel

  9. Image Panel

  10. ROIs

  11. Control Panel Graphics Objects Property of Rendered Area Property of Graphics Object

  12. ROIs

  13. ROIs

  14. File/OpenTrack/Go Directory open hardi.trk Explaination about what you are seeing Slice Filter, Change % Fiber to 50: Change Fiber plan in X Y and Z to 52:70, 52:70 and 32:36. Change % of Fiber to 50 to 0 for a given plane. Change Line to tube for skip to 90% for a given plane. Change color of fibers Directional Helix angle Image Map with hardi_b0 images with different color map Create a ball ROI from ROI planel Ball at 56,68,36 with radius 4.00 mm Find all fiber passing through this ROI Move this ROI and see how fiber change from one area to other area. Loading Fiber

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  18. Create to ball at (72,61,57) and (69,62,23) location of radius 2.00 mm Find all fiber passing through both ROIS Vary radius of ROIs and find big fiber bundle Create Four balls with two fiber groups on both hemi-sphere. Find Fiber passing through each group Change color for each fiber groups Using Ball ROIs Find Motor fibers Find Corpus Callosum fiber connecting to different lobes. Create Some known fiber tracks Cortico-spinal tracks V1 – LGN track Longitudinal faculliculus Others ROIS

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  26. Locate fibers in subcortical regions Thalamus Amygdale Pons Corpus Callosum and Singulum Show some area with fiber crossing Loading functional ROIs Find Motor Fibers Find Lang Fibers Different areas

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