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Hidden Markov Model

Hidden Markov Model

Hidden Markov Model. Xiaole Shirley Liu STAT115, STAT215. Outline. Markov Chain Hidden Markov Model Observations, hidden states, initial, transition and emission probabilities Three problems Pb(observations): forward, backward procedure Infer hidden states: forward-backward, Viterbi

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694 views • 40 slides
Hidden Markov Model

Hidden Markov Model

Hidden Markov Model. Xiaole Shirley Liu STAT115, STAT215, BIO298, BIST520. Outline. Markov Chain Hidden Markov Model Observations, hidden states, initial, transition and emission probabilities Three problems Pb(observations): forward, backward procedure

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623 views • 38 slides
Genome Sequencing and Assembly High throughput Sequencing

Genome Sequencing and Assembly High throughput Sequencing

Genome Sequencing and Assembly High throughput Sequencing. Xiaole Shirley Liu STAT115, STAT215, BIO298, BIST520. Competing Sequencing Strategies. Clone-by-clone and whole-genome shotgun . Clone-by-Clone Shotgun Sequencing. E.g. Human genome project Map construction Clone selection

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602 views • 25 slides
Literature Retrieval and Mining

Literature Retrieval and Mining

Literature Retrieval and Mining. Xiaole Shirley Liu STAT115, STAT215, BIO298, BIST520. Outline. Introduction to PubMed PubMed Related Articles Search engines and Google features H index. PubMed. PubMed ? NCBI ? NLM ? NIH Biomedical literature database

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588 views • 23 slides
Immuno and Epigenetic Therapies

Immuno and Epigenetic Therapies

Immuno and Epigenetic Therapies. Xiaole Shirley Liu STAT115, STAT215, BIO298, BIST520. Cancer Immunology. Would tumor grow in another individual?. Effector Lympocytes. Lymphocytes express highly specific ANTIGEN RECEPTORS on their surface

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450 views • 20 slides

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