Supersecondary structure - PowerPoint PPT Presentation

Biomedical Information Extraction

Biomedical Information Extraction. Outline. Intro to biomedical information extraction PASTA [Demetriou and Gaizauskas] Biomedical named entities Name variability [Cohen, Dolbey, Acquaah-Mensah, and Hunter] Name tagging [Tanabe and Wilbur]. PASTA. [Demetriou and Gaizauskas]

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C to C Phi φ N to N Psi ψ

C to C Phi φ N to N Psi ψ. Takes 4 atoms to define rotation about a bond!. Trans vs. Cis peptide bonds Trans, carbonyl oxygen is on opposite side of peptide bond from amide hydrogen. Fischer &amp; Sumner Proteins have regular structure. Hydrophobic effect.

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245 views • 15 slides

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