'Substitution model' presentation slideshows

Introduction to Phylogenetics

905 views • 72 slides

Closures and Streams

Closures and Streams. More on Evaluations. Scheme Expressions. Constants: numbers, booleans . Variables: names for values. Created using the special form define Special forms have special rules for evaluation. Cannot be redefined

615 views • 51 slides

Lab3: Bayesian phylogenetic Inference and MCMC

Lab3: Bayesian phylogenetic Inference and MCMC. Department of Bioinformatics & Biostatistics, SJTU. Topics. Phylogenetics Bayesian inference and MCMC: overview Bayesian model testing MrBayesian tutorial and application Nexus file Configuration of the process How to execute the process

1.01k views • 49 slides

Jeremy R. Johnson

Programming Languages (CS 550) Operational Semantics of Scheme using Substitution and the Lambda Calculus. Jeremy R. Johnson. TexPoint fonts used in EMF. Read the TexPoint manual before you delete this box.: A A A A A A. Starting Point Informal Scheme Semantics.

545 views • 45 slides

Jeremy R. Johnson

Programming Languages (CS 550) Operational Semantics of Scheme using Substitution and the Lambda Calculus. Jeremy R. Johnson. TexPoint fonts used in EMF. Read the TexPoint manual before you delete this box.: A A A A A A. Starting Point Informal Scheme Semantics.

460 views • 45 slides

Jeremy R. Johnson

Programming Languages (CS 550) Lecture 7 Summary Operational Semantics of Scheme using Substitution. Jeremy R. Johnson. TexPoint fonts used in EMF. Read the TexPoint manual before you delete this box.: A A A A A A. Starting Point Informal Scheme Semantics.

487 views • 42 slides

CS51: Fun with Infinite Data Structures

462 views • 40 slides

3D Substitution Model for Limb Growth and Pattern Formation

3D Substitution Model for Limb Growth and Pattern Formation. Ying Zhang 1 , Stuart A. Newman 2 , James A. Glazier 1 1.Biocomplexity Institute, Department of Physics, Indiana University 2.New York Medical College. :. Substitution model. Patterning a Developmental

375 views • 25 slides

Distance-based methods

Distance-based methods. Xuhua Xia xxia@uottawa.ca http://dambe.bio.uottawa.ca. Lecture Outline. Objectives in this lecture Grasp the basic concepts distance-based tree-building algorithms

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GSR The Gene Sequence evolution model with iid Rate variation over tree

296 views • 21 slides

Maximum Likelihood

Flips usage of probability function A typical calculation: P(h|n,p) = C(h, n) * p h * (1-p) (n-h) The implied question: Given p of success in single trial, what is probability of h success over n trials?. Maximum Likelihood. The ML question. The ML calculation:

428 views • 19 slides

Phylogenetic inference on the evolution of protein-coding genes

Phylogenetic inference on the evolution of protein-coding genes. Lecture 1: Inferences about evolutionary distance Jesse Bloom, jbloom@fhcrc.org. The forward evolutionary process: s (t + dt ) = f [ m { s (t)}]. w ildtype sequence s (t). mutation m(s).

286 views • 15 slides