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Efficient Algorithms for Imputation of Missing SNP Genotype Data

Efficient Algorithms for Imputation of Missing SNP Genotype Data

Efficient Algorithms for Imputation of Missing SNP Genotype Data. Mihajlovi ? , ambiz2005@gmail.com V. Milutinovi ? , vm@etf.rs. Definitions . Imputation Given a relevant data set with missing values Discover hidden knowledge between the known values

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1.35k views • 114 slides
The role of phenotyping in dairy cattle improvement in the genomic era

The role of phenotyping in dairy cattle improvement in the genomic era

The role of phenotyping in dairy cattle improvement in the genomic era. John B. Cole Animal Genomics and Improvement Laboratory Agricultural Research Service, USDA, Beltsville, MD john.cole@ars.usda.gov. What is a phenotype?.

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725 views • 49 slides
Genetic improvement program for dairy cattle

Genetic improvement program for dairy cattle

Genetic improvement program for dairy cattle. 100 01111 0 1 220020012

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667 views • 39 slides
New Tools for Genomic Selection of Livestock

New Tools for Genomic Selection of Livestock

New Tools for Genomic Selection of Livestock. Illumina genotyping arrays. BovineSNP50 54,001 SNPs (version 1) 54,609 SNPs (version 2) 45,187 SNPs used in evaluation BovineHD 777,962 SNPs Only BovineSNP50 SNPs used >1,700 SNPs in database BovineLD 6,909 SNPs Allows for additional SNPs.

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385 views • 37 slides
Genome-wide association studies

Genome-wide association studies

Genome-wide association studies. Usman Roshan. SNP. Single nucleotide polymorphism Specific position and specific chromosome. SNP genotype. Suppose this is the DNA on chromosome 1 starting from position 1.

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361 views • 20 slides
BNFO 602 Lecture 1

BNFO 602 Lecture 1

BNFO 602 Lecture 1. Usman Roshan. Bio background. DNA Transcription and translation Proteins: folding and structure SNPs SNP genotyping, sequencing. Representing DNA in a format manipulatable by computers. DNA is a double-helix molecule made up of four nucleotides: Adenosine (A)

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249 views • 16 slides

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