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Transcription factor binding motifs (part II)

Transcription factor binding motifs (part II). 10/22/07. Information from negative control. Motivation: combine information from TF binding and non-binding sequences to identify discriminative information. Methods: REDUCE (Bussmaker et al. 2001) Motif Regressor (Conlon et al. 2003).

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575 views • 45 slides

Parallel Detection of Regulatory Elements with gMP

Parallel Detection of Regulatory Elements with gMP. Bertil Schmidt, Lin Feng, Amey Laud, Yusdi Santoso. Damayanti Gupta CMSC 838 Presentation. Motivation. Fundamental question How are expression levels of thousands of genes regulated ? Very important Understanding of gene function

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374 views • 28 slides

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Significant motifs - PowerPoint PPT Presentation

Transcription factor binding motifs (part II)

Parallel Detection of Regulatory Elements with gMP