'Sequence weighting' presentation slideshows

Sequence motifs, information content, and sequence logos

Sequence motifs, information content, and sequence logos. Morten Nielsen, CBS, Depart of Systems Biology, DTU. Why weight matrices?. The vast majority of biological motifs are characterized by a linear motif Post translational modifications Signal peptides T cell epitopes

580 views • 46 slides

Sequence motifs, information content, and sequence logos

Sequence motifs, information content, and sequence logos. Morten Nielsen, CBS, Depart of Systems Biology, DTU. Objectives. Visualization of binding motifs Construction of sequence logos Understand the concepts of weight matrix construction

605 views • 45 slides

Profile Hidden Markov Models

655 views • 33 slides

Sequence information, logos and Hidden Markov Models

Sequence information, logos and Hidden Markov Models. Morten Nielsen, CBS, BioCentrum, DTU. Information content. Information and entropy Conserved amino acid regions contain high degree of information (high order == low entropy)

307 views • 18 slides