Sequence quality assessment - PowerPoint PPT Presentation

Sequence Quality Assessment

Sequence Quality Assessment. NanoPlot - Summarizing data. Designed for Iong read data (long read tools in infancy - change often). What does it tell you? Total data Sequence length distribution Sequence quality distribution. FastQC - Summarizing data. Designed for Illumina data.

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388 views • 34 slides

RNA- Seq Data Analysis

RNA- Seq Data Analysis. UND Genomics Core. RNA- Seq Analysis Pipeline. Sequence Quality Control Assessment. Adapter Trimming. Alignment. Quantification. Differential expression. Software For RNA- Seq Analysis. Fastq files. Contains sequence and quality information. Q-score.

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666 views • 22 slides

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