Sequence patterns - PowerPoint PPT Presentation

Database Searching

Database Searching. Searching for Data. Text Patterns LookUp Sequence Patterns FindPatterns ProfileSearch Sequence Similarity FastA, TFastA BLAST, NetBLAST. Introduction to Data Base Searching. What are you looking for?. &quot;Exact&quot; matches.

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Lecture 6. Hidden Markov Models

Lecture 6. Hidden Markov Models. The Chinese University of Hong Kong CSCI3220 Algorithms for Bioinformatics. Lecture outline. Motivating example Hidden Markov model basics The three problems related to HMM Computing data likelihood Forward algorithm Backward algorithm Using a model

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751 views • 60 slides

Complex Event Analytics: Online Aggregation of Stream Sequence Patterns

Complex Event Analytics: Online Aggregation of Stream Sequence Patterns. Yingmei Qiy , Lei Caoz , Medhabi Rayz , Elke A. Rundensteiner. Overview. Complex event processing (CEP) what is it all about why is it difficult Aggregation queries in CEP problem definition

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369 views • 35 slides

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