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Proteotypic - PowerPoint PPT Presentation

Proteogenomics

Proteogenomics. Kelly Ruggles, Ph.D. Proteomics Informatics Week 9. Proteogenomics: Intersection of proteomics and genomics. As the cost of high-throughput genome sequencing goes down whole genome, exome and RNA sequencing can be easily attained for most proteomics experiments.

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1.97k views • 42 slides

Introduction

Georgetown University. OMICS 17 Protein Mix LCQ MS/MS Dataset Semi-tryptic search of SwissProt 39408 spectra searched ~ 36 times: - Target + 2 decoys, 7 engines, 1+ vs 2+/3+ charge. 3969 search jobs, weeks of CPU time. Total elapsed time (Mascot bottleneck): < 28 hours.

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64 views • 1 slides

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Proteotypic - PowerPoint PPT Presentation

Proteogenomics

Introduction