'Protein blast' presentation slideshows

Sequence Comparison of Database B asic L ocal A lignment S earch T ool

Sequence Comparison of Database B asic L ocal A lignment S earch T ool. Widely used similarity search tool Heuristic approach based on Smith Waterman algorithm Finds best local alignments Provides statistical significance All combinations (DNA/Protein) query and database .

725 views • 58 slides

>sequence 4

>sequence 4

453 views • 36 slides

Genome of the week

Genome of the week. Bacillus subtilis. Gram-positive soil bacterium Genetically tractable, well-studied Developmental pathways (sporulation, genetic competence) Industrial and agricultural importance 4.2 Mb genome (sequence completed 1997) Close relative of Bacillus anthracis (Anthrax).

468 views • 35 slides

Genome of the week

Genome of the week. Bacillus subtilis. Gram-positive soil bacterium Genetically tractable, well-studied Developmental pathways (sporulation, genetic competence) Industrial and agricultural importance 4.2 Mb genome (sequence completed 1997) Close relative of Bacillus anthracis (Anthrax).

353 views • 35 slides

NGS Bioinformatics Workshop 1.3 Tutorial - Sequence Alignment and Searching

NGS Bioinformatics Workshop 1.3 Tutorial - Sequence Alignment and Searching. March 22 nd , 2012 IRMACS 10900 Facilitator: Richard Bruskiewich Adjunct Professor, MBB. Learning Objectives. A few more Linux tips FASTA and BLAST on the web Local BLAST Local installation of BLAST

575 views • 31 slides

Psi-Blast

Psi-Blast. Morten Nielsen, Department of systems biology, DTU. Objectives. Understand why BLAST often fails for low sequence similarity See the beauty of sequence profiles Position specific scoring matrices (PSSMs) Use BLAST to generate Sequence profiles

617 views • 30 slides

Diversity of Life: Introduction to Biological Classification

BioEd Online. Diversity of Life: Introduction to Biological Classification. BioEd Online. Why Do We Classify Organisms?. Biologists group organisms to represent similarities and proposed relationships.

409 views • 24 slides

B asic L ocal A lignment S earch T ool

B asic L ocal A lignment S earch T ool. BLAST Why Use BLAST?. Finding Model Organisms for Study of Disease. Can yeast be used as a model organism to study cystic fibrosis ?. Model Organisms. Cystic fibrosis is a genetic disorder that affects humans

245 views • 24 slides

BLAST

You have worked for 2 years to isolate a gene involved in axon guidance. You sequence the cDNA clone that contains axon guidance activity. The sequence gets emailed to your account. What do you do next?. BLAST. BLAST WHAT?. Amino vs Nucleic??

370 views • 13 slides

BLAST:

540 views • 10 slides