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Georgetown University. Peptide Atlas A8_IP LTQ MS/MS Dataset Tryptic search of Human ESTs using PepSeqDB [2] 107084 spectra searched ~ 26 times: - Target + 2 decoys, 5 engines, 1+ vs 2+/3+ charge. 8685 search jobs, 25.7 days of total CPU time. 5211 TeraGrid TKO jobs in < 2 hours (143 nodes)

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Georgetown University. Improving the Sensitivity of Peptide Identification from Tandem Mass Spectra using Meta-Search, Grid-Computing, and Machine-Learning. Nathan J. Edwards, Georgetown University Medical Center. Annual Meeting, 2009. Introduction.

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Introduction

Georgetown University. OMICS 17 Protein Mix LCQ MS/MS Dataset Semi-tryptic search of SwissProt 39408 spectra searched ~ 36 times: - Target + 2 decoys, 7 engines, 1+ vs 2+/3+ charge. 3969 search jobs, weeks of CPU time. Total elapsed time (Mascot bottleneck): < 28 hours.

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Peparml meta search engine - PowerPoint PPT Presentation

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Introduction