Nucleotide frequencies - PowerPoint PPT Presentation

Patterns in the DNA, RNA, whether they are functionally relevant, and how to find them

Patterns in the DNA, RNA, whether they are functionally relevant, and how to find them. Strand asymmetries (nucleotide frequencies). GC skew (inner circle, G-C/G+C) in a complete genome ( Nitrosomas_ europaea). GC skew switches often indicate the origin/terminus of replication in Bacteria.

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783 views • 64 slides

Mathematics and computation behind BLAST and FASTA

Mathematics and computation behind BLAST and FASTA. Xuhua Xia xxia@uottawa.ca http://dambe.bio.uottawa.ca. Bioinformatics-enabled research. Sequence variation: UU C U C AA CC AA CC A U AAA G A U A U UU C U C U A C AAA CC A C AAA G A C A U UU C U C AA CC AA CC A U AAA G A U A U

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743 views • 25 slides

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