'Molecular replacement' presentation slideshows

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Molecular replacement and model-building using distant homology models as templates

Molecular replacement and model-building using distant homology models as templates. ACA Trueblood Award Lecture July 24, 2013 Honolulu, Hawaii. Tom Terwilliger Los Alamos National Laboratory. Kenneth Trueblood 1920-1998.

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First Aid & Pathology Data quality assessment in PHENIX

First Aid & Pathology Data quality assessment in PHENIX. Peter Zwart. Introduction. PHENIX: Software for bio-molecular crystallography Molecular replacement ( PHASER ) Substructure solution ( SOLVE , HYSS ) Phasing ( SOLVE ; PHASER ) Model building ( RESOLVE; TEXTAL )

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cab55342 Autobuild model Density-modified map

Autobuilding starting with morphed model. cab55342 Autobuild model Density-modified map. Autobuilding starting with morphed model. cab55342 Morphed model (yellow) Autobuild model (green). Autobuilding cab55342 starting with morphed model.

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A Molecular Replacement Pipeline Garib Murshudov Chemistry Department, University of York

?. A Molecular Replacement Pipeline Garib Murshudov Chemistry Department, University of York. Introduction. Diagram showing the percentage of structures in the PDB solved by different techniques 67.5% of structures are solved by Molecular Replacement (MR)

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A Molecular Replacement Pipeline Garib Murshudov Chemistry Department, University of York

?. A Molecular Replacement Pipeline Garib Murshudov Chemistry Department, University of York. Introduction. Diagram showing the percentage of structures in the PDB solved by different techniques 67.5% of structures are solved by Molecular Replacement (MR)

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CCP4 - Software for Protein Structure Solution

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CCP4 - Software for Protein Structure Solution

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Overview of MR in CCP4 II

Overview of MR in CCP4 II. Roadmap. http://www.ccp4.ac.uk/dist/ccp4i/help/roadmaps/. Information On Molecular Replacement. CCP4 Study Weekend Proceedings 2001 Acta D57 October 2001 Part 10 http://www.ccp4.ac.uk/dist/examples/tutorial2000/html/. CCP4 Programs Used In MR.

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Outline

BALBES (Current working name) A. Vagin, F. Long, J. Foadi, A. Lebedev G. Murshudov Chemistry Department, University of York. Outline. Introduction Database System manager Scientific programs Calibrating the System A Example Release and Development Plan. Introduction.

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MrBUMP progress report

MrBUMP progress report. Ronan Keegan & Martyn Winn Daresbury Laboratory. About MrBUMP. M olecular R eplacement with Bu lk M odel P reparation

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Overview of developments within CCP4

Overview of developments within CCP4. Generation 1 ccp4i tasks Generation 2 isolated scripts / web service Generation 3 integrated environment. Molecular Replacement - Mr Bump. Ronan Keegan and Martyn Winn (DL) automated framework for Molecular Replacement

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CCP4 Molecular Replacement Model Generation

CCP4 Molecular Replacement Model Generation Create a CCP4i task for generating Molecular Replacement models. - Selecting suitable PDB entries, based on e.g. sequence - Producing the best search model from these PDB entries. (altered sequence, multimers, conformational variants)

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CCP4 Version 4.0 ...

CCP4 Version 4.0. The most recent version of the CCP4 suite is 4.0, which was released in January 2000, with a minor patch release shortly after. Below are some of the highlights in this latest version of the Suite. molrep. Data harvesting.

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