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creativecommons/licenses/by-sa/2.0/

creativecommons/licenses/by-sa/2.0/

http://creativecommons.org/licenses/by-sa/2.0/. RNA Structure Prediction. Prof:Rui Alves ralves@cmb.udl.es 973702406 Dept Ciencies Mediques Basiques, 1st Floor, Room 1.08 Website of the Course: http://web.udl.es/usuaris/pg193845/Courses/Bioinformatics_2007/

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759 views • 64 slides
Basics of RNA structure and modeling

Basics of RNA structure and modeling

Basics of RNA structure and modeling. Rui Alves. RNA functions. Storage/transfer of genetic information Genomes many viruses have RNA genomes single-stranded (ssRNA) e.g., retroviruses (HIV) double-stranded (dsRNA) Transfer of genetic information

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772 views • 52 slides
Chapter 6 The Secondary Structure Prediction of RNA

Chapter 6 The Secondary Structure Prediction of RNA

Chapter 6 The Secondary Structure Prediction of RNA. Outline. Secondary Structure of RNA The RNA Maximum Base Pair Matching Algorithm Loop Dependent Free Energy Rules Minimum Free Energy Algorithm. Secondary Structure of RNA.

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583 views • 40 slides
Protein Structure Prediction

Protein Structure Prediction

Protein Structure Prediction. Protein Sequence +. Dr. G.P.S. Raghava. Structure. Protein Structure Prediction. Experimental Techniques X-ray Crystallography NMR Limitations of Current Experimental Techniques Protein DataBank (PDB) -> 23000 protein structures

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373 views • 34 slides
mRNA secondary structure optimization using a correlated stem-loop prediction

mRNA secondary structure optimization using a correlated stem-loop prediction

mRNA secondary structure optimization using a correlated stem-loop prediction. Nucleic Acids Res. 2013 Apr 1;41(6):e73. doi : 10.1093/ nar /gks1473. Epub 2013 Jan 15. Presented by WONG Pak Kan. Agenda. Background Motivation Methodology Results Discussion.

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797 views • 25 slides
Esposito, D., Heitsch, C. E., Poznanovik, S. and Swenson, M. S. Georgia Institute of Technology

Esposito, D., Heitsch, C. E., Poznanovik, S. and Swenson, M. S. Georgia Institute of Technology

Improved RNA Secondary Structure Prediction Using Stochastic Context Free Grammars. Esposito, D., Heitsch, C. E., Poznanovik, S. and Swenson, M. S. Georgia Institute of Technology. Conclusions. Abstract. Introduction.

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80 views • 1 slides

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