'Manual annotation' presentation slideshows

Information Extraction from the Cancer Literature The Pediatric Hematology/Oncology Seminar Series

684 views • 53 slides

A Collaborative, Web-based Annotation Environment

526 views • 43 slides

Ontologies, data standards and controlled vocabularies

Ontologies, data standards and controlled vocabularies. Why use standards and CVs?. Very important in High-throughput biology to sort through the vast amounts of data To use the same data labels universally To enable quick retrieval of data To enable easy comparison of data

485 views • 36 slides

GNPAnnot Community Annotation System applied to sugarcane BAC clone sequences

GNPAnnot Community Annotation System applied to sugarcane BAC clone sequences. Valentin GUIGNON PAG Sugarcane Genome Sequencing Initiative Sunday, 16 January 2011. >10 studied species. 9 partners. GDEC. Spo. BIVI. What is GNPAnnot. 3 bioinformatics platform. What is GNPAnnot. Goals.

416 views • 34 slides

Towards the inference of determinants of sexual health from the EHR: corpus creation

Towards the inference of determinants of sexual health from the EHR: corpus creation Information Extraction and Classification S39.

301 views • 30 slides

Tag Dictionaries Accelerate Manual Annotation

378 views • 26 slides

Tree-based Translation with Tectogrammatical Representation

Tree-based Translation with Tectogrammatical Representation. Jan Haji ? Institute of Formal and Applied Linguistics School of Computer Science Faculty of Mathematics and Physics Charles University, Prague Czech Republic. transfer source target.

334 views • 24 slides

EAnnot: A genome annotation tool using experimental evidence

326 views • 22 slides

PDT: The Tools

PDT: The Tools. Jan Haji ? Institute of Formal and Applied Linguistics School of Computer Science Faculty of Mathematics and Physics Charles University, Prague Czech Republic. Tectogrammatical Annotation Tools. Manual annotation Speech Reconstruction: MEd

287 views • 21 slides

Manual Annotation of a mouse pancreas-specific microarray chip:PancChip4.0

Generally describe the PancChip. How we perform the manual annotation/tasks. Progress so far, coverage. Characterization of PancChip manual & computational results. What we have learned so far from this effort. Manual Annotation of a mouse pancreas-specific microarray chip:PancChip4.0.

215 views • 21 slides

Developing Semantic Web Sites: Results and Lessons Learnt

Developing Semantic Web Sites: Results and Lessons Learnt. Enrico Motta , Yuangui Lei, Martin Dzbor, Vanessa Lopez, John Domingue, Jianhan Zhu, Liliana Cabral, Alex Goncalves, Victoria Uren. Motivation for KMi Sem Web. Key Objective

335 views • 20 slides

Gerd Fliedner Computational Linguistics Saarland University

314 views • 19 slides

Manual Annotation of the human and mouse gene index: allgenes

Manual Annotation of the human and mouse gene index: www.allgenes.org. Brian Brunk, Jonathan Crabtree, Sharon Diskin, Joan Mazzarelli, Chris Stoeckert and Nico Zigouras

192 views • 19 slides

Manual Annotation of a mouse pancreas-specific microarray chip:PancChip4.0

Generally describe the PancChip. How we perform the manual annotation/tasks. Progress so far, coverage. Characterization of PancChip manual & computational results. What we have learned so far from this effort. Manual Annotation of a mouse pancreas-specific microarray chip:PancChip4.0.

192 views • 19 slides

Automatic QRS Complex Detection Algorithm Designed for a Novel Electrocardiogram Recording Device

Automatic QRS Complex Detection Algorithm Designed for a Novel Electrocardiogram Recording Device. Dorthe Bodholt Nielsen, Ph.D. student, DELTA / Technical University of Denmark Contact: dbn@delta.dk. Co-authors Kenneth Egstrup, OUH Svendborg Hospital Jens Branebjerg, DELTA

331 views • 16 slides

MASC The Manually Annotated Sub-Corpus of American English

MASC The Manually Annotated Sub-Corpus of American English. Nancy Ide, Collin Baker, Christiane Fellbaum, Charles Fillmore, Rebecca Passonneau. MASC. Manually Annotated Sub-Corpus NSF-funded project to provide a sharable, reusable annotated resource with rich linguistic annotations

344 views • 15 slides

VectorBase genome annotation

VectorBase genome annotation. VectorBase-EBI, European Bioinformatics Institute, Wellcome Trust Genome Campus, Hinxton UK. Overview of current annotation system. Assembled genome. Sequencing centre gene predictions. VectorBase gene predictions. Merge into canonical set. Protein analysis.

252 views • 11 slides

Mining the web to improve semantic-based multimedia search and digital libraries

Mining the web to improve semantic-based multimedia search and digital libraries http://gate.ac.uk/ http://nlp.shef.ac.uk/ Horacio Saggion Kalina Bontcheva University of Sheffield 21 November 2006 IST Event 2006 Web Mining and Semantic Web: Networking with industry and academia

275 views • 9 slides

Columbia CCLS: Committed Belief and Dialog Acts

Columbia CCLS: Committed Belief and Dialog Acts. Mona Diab Rebecca Passonneau Owen Rambow {mdiab,becky,rambow}@ccls.columbia.edu. Columbia CCLS Activities: Committed Belief. Identify in text what the writer (speaker) actually believes is true

251 views • 8 slides

ESTs, cDNAs

Generating & curating gene models at TAIR. ESTs, cDNAs. 2. 4. 3. User submissions. 1a. New release. Computational pipeline. Manual annotation. TAIR web. 1b. Internal TAIR projects. Generating & curating gene models at TAIR. Functional gene annotation.

148 views • 3 slides