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Parametric Bootstrap (Efron 1985; Huelsenbeck et al. 1996)

Parametric Bootstrap (Efron 1985; Huelsenbeck et al. 1996). 1) build best tree 2) generate new simulated data sets using estimated branch lengths and other parameters (e.g., alpha and substitution model) (from tree/data) 3) build new tree for each simulated data set

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125 views • 12 slides

A unified approach to model selection using the likelihood ratio test

A unified approach to model selection using the likelihood ratio test. Fraser Lewis Lucy Gilbert Adam Butler. H. Methods in Ecology and Evolution Podcast. Ixodes ricinus. Likelihood ratio tests are widely used for comparing nested models

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263 views • 12 slides

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Log likelihoods - PowerPoint PPT Presentation

Parametric Bootstrap (Efron 1985; Huelsenbeck et al. 1996)

A unified approach to model selection using the likelihood ratio test