'Length distribution' presentation slideshows

Comp. Genomics

Comp. Genomics. Recitation 9 11/3/06 Gene finding using HMMs & Conservation. Outline. Gene finding using HMMs Adding trees to HMMs phyloHMM N-SCAN BLAST+ Gene Finding SGP2 Examples. Markov Sequence Models. Key: distinguish coding/non-coding statistics Popular models:

367 views • 28 slides

Genomic ORFans: Past, Present and Future

334 views • 26 slides

Data Broadcast in Asymmetric Wireless Environments Nitin H. Vaidya Sohail Hameed

367 views • 23 slides

Estimation of ratio of fin weight to body weight of sharks in the eastern Pacific Ocean in 2006

Estimation of ratio of fin weight to body weight of sharks in the eastern Pacific Ocean in 2006. Soon-Song Kim, Doo-Hae An, Dae-Yeon Moon and Seon Jae Hwang National Fisheries Research and Development Institute (NFRDI), Republic of Korea. The survey area.

248 views • 15 slides

Average Quality Scores Scores Overview

Average Quality Scores Scores Overview. D01- 2 Total Sequences 55,477,390 Sequence length 100 %GC 45%. D01- 1 Total Sequences 55477390 Sequence length 100 %GC 45%. Average GC and Duplications Overview. D01- 2 Total Sequences 55,477,390 Sequence length 100 %GC 45%.

226 views • 10 slides

Levy- flight S cale-free survival strateg y ? Yes.

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Explicit length distribution models in Iscan

Explicit length distribution models in Iscan. Lab meeting 8/20/2003 By Chaochun Wei. Length distribution models in Iscan. Explicit length distribution models: Exon and intron. Effect of the intron length limit. Effect of the smoothlization of the length distribution models.

239 views • 8 slides

Splicing Enhancer Scoring in ISCAN

Splicing Enhancer Scoring in ISCAN. Overview. Method SC35 splicing enhancer WMM (SELEX experiments by M. Zhang & A. Krainer, CHSL) 6-base long pattern Training set “Clean” set of 6051 Refseq genes (no alternative splicing) Results

218 views • 4 slides

GAP (N/size)

A. B. 1000000. Contig number. 100000. Scaffold number. 10000. 1000. 100. 10. 1. 200. 400. 600. 800. 2000. 1200. 1400. 1600. 1800. 2200. 2400. 1000. 2600. 2800. 3000. Contig length distribution. Scaffold length distribution (bp). 100000. C. D. 10000. Unigene number.

99 views • 1 slides