'Inverted repeats' presentation slideshows

Introduction to Bioinformatics

Introduction to Bioinformatics. Pairwise Sequence Alignment Prof. Dr. Nizamettin AYDIN naydin @yildiz .edu.tr. Outline. Introduction to sequence alignment pair wise sequence alignment The Dot Matrix Scoring Matrices Gap Penalties Dynamic Programming.

1.49k views • 149 slides

841 views • 62 slides

DNA TOPOLOGY

DNA TOPOLOGY. De Witt Sumners Department of Mathematics Florida State University Tallahassee, FL sumners@math.fsu.edu. Pedagogical School: Knots & Links: From Theory to Application. Pedagogical School: Knots & Links: From Theory to Application. De Witt Sumners: Florida State University

1.01k views • 62 slides

Outline of Talk

Outline of Talk. Protein Genes SNPs Haplotypes Finding a Disease Locus . Size of the Genomes. bacteria. yeast. round worm. fruit fly. flowering plant. The Human Genome. What the letters stand for. DNA has four chemical subunits, called nucleotide bases abbreviated A, C, G, T.

711 views • 61 slides

A lignment Class II

A lignment Class II. We continue where we stopped last week: Dynamic programing. a gene. transcription. pre-mRNA. splicing. mature mRNA. translation. protein. Reminder -Structure of a genome. Pairwise Sequence Alignment. Example Which one is better?. HEAGAWGHEE. PAWHEAE. HEAGAWGHE-E.

692 views • 60 slides

Tomato Finishing Workshop

Tomato Finishing Workshop. April 2008 Specific Problems and Examples. Other Strategies for Finishing Large Repeats. High Repeat Content Clones and Alternative Libraries Large Insert Libraries and TILs Reading coverage histogram in gap4 and diploid plot BLAST & Pre-analysis Scaffolds

347 views • 34 slides

Dot Plots

Dot Plots. DNA dot plots. Identification of regions of Similarity between two sequences Insertions-deletions: Introns Repetitive regions (self-self analysis) ? Inverted repeats. Repeats. All DNA sequences contain repeats. Repeats. All DNA sequences contain repeats. Window size.

511 views • 28 slides

Dot Plots

Dot Plots. DNA dot plots. Identification of regions of Similarity between two sequences Insertions-deletions: Introns Repetitive regions (self-self analysis) ? Inverted repeats. Repeats. All DNA sequences contain repeats. Repeats. All DNA sequences contain repeats. Window size.

790 views • 28 slides

Bhattacharyya et al, 1990

The wrinkled-seed character of pea described by Mendel is caused by a transposon-like insertion in a gene encoding starch-branching enzyme. Bhattacharyya et al, 1990. Storage compounds are located in the embryo of dicotyledonous seeds. Seed coat. Endosperm. Embryo.

278 views • 24 slides

title

Comparative Microbial Genomics Group. Center for Biological Sequence Analysis The Technical University of Denmark DTU. title. Part 3: DNA Repeats In Bacterial Genomes. Dave Ussery Advanced Bioinformatics course lecture 14 November, 2003.

429 views • 19 slides