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Incorrect mappings - PowerPoint PPT Presentation

Key idea: SHM identifies matching by incrementally shifting the read against the reference

Shifted Hamming Distance (SHD) : A Fast and Accurate SIMD-Friendly Filter for Local Alignment in Read Mapping. Hongyi Xin 1 , John Greth 1 , John Emmons 1 , Gennady Pekhimenko 1 , Carl Kingsford 1 , Can Alkan 2 , Onur Mutlu 1.

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Incorrect mappings - PowerPoint PPT Presentation

Key idea: SHM identifies matching by incrementally shifting the read against the reference